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Protein

50S ribosomal protein L9

Gene

rplI

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA and protein L31.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L9
Gene namesi
Name:rplI
Ordered Locus Names:DR_0102
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001766351 – 14650S ribosomal protein L9Add BLAST146

Proteomic databases

PRIDEiQ9RY49

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L31.6 Publications

Protein-protein interaction databases

STRINGi243230.DR_0102

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NKWX-ray3.10F1-146[»]
1NWXX-ray3.50F1-146[»]
1NWYX-ray3.30F1-146[»]
1SM1X-ray3.42F1-146[»]
1XBPX-ray3.50F1-146[»]
4V49X-ray8.70F1-52[»]
4V4AX-ray9.50F1-52[»]
4V4GX-ray11.50I1-52[»]
ProteinModelPortaliQ9RY49
SMRiQ9RY49
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RY49

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105K9Q Bacteria
COG0359 LUCA
HOGENOMiHOG000040337
InParanoidiQ9RY49
KOiK02939
OMAiYLIPQGF
OrthoDBiPOG091H01AX

Family and domain databases

Gene3Di3.10.430.100, 1 hit
3.40.5.10, 1 hit
HAMAPiMF_00503 Ribosomal_L9, 1 hit
InterProiView protein in InterPro
IPR000244 Ribosomal_L9
IPR009027 Ribosomal_L9/RNase_H1_N
IPR020594 Ribosomal_L9_bac/chp
IPR020069 Ribosomal_L9_C
IPR036791 Ribosomal_L9_C_sf
IPR020070 Ribosomal_L9_N
IPR036935 Ribosomal_L9_N_sf
PANTHERiPTHR21368 PTHR21368, 1 hit
PfamiView protein in Pfam
PF03948 Ribosomal_L9_C, 1 hit
PF01281 Ribosomal_L9_N, 1 hit
SUPFAMiSSF55653 SSF55653, 1 hit
SSF55658 SSF55658, 1 hit
TIGRFAMsiTIGR00158 L9, 1 hit
PROSITEiView protein in PROSITE
PS00651 RIBOSOMAL_L9, 1 hit

Sequencei

Sequence statusi: Complete.

Q9RY49-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVILLEPSR LGKTGEVVSV KDGYARNWLI PQGLAVSATR TNMKTLEAQL
60 70 80 90 100
RSIEKRQAQE KAVAEDLASR LNGVAVELSV RAGEGKIYGA VTHQDVANSL
110 120 130 140
DQLGFDVDRR KIDMPKTVKE VGEYDIAYRA HPEVTIPMKL VVHAAK
Length:146
Mass (Da):16,065
Last modified:May 1, 2000 - v1
Checksum:iC0F80164FD0725C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA Translation: AAF09694.1
PIRiC75559
RefSeqiNP_293828.1, NC_001263.1
WP_010886750.1, NZ_CP015081.1

Genome annotation databases

EnsemblBacteriaiAAF09694; AAF09694; DR_0102
GeneIDi1799186
KEGGidra:DR_0102
PATRICifig|243230.17.peg.267

Similar proteinsi

Entry informationi

Entry nameiRL9_DEIRA
AccessioniPrimary (citable) accession number: Q9RY49
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 13, 2001
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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