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Protein

50S ribosomal protein L14

Gene

rplN

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Forms part of two intersubunit bridges in the 70S ribosome (By similarity). Binds to 23S rRNA.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L14UniRule annotation
Gene namesi
Name:rplNUniRule annotation
Ordered Locus Names:DR_0321
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001285391 – 13450S ribosomal protein L14Add BLAST134

Interactioni

Subunit structurei

In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8 (By similarity). Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19.By similarity6 Publications

Protein-protein interaction databases

STRINGi243230.DR_0321.

Structurei

Secondary structure

1134
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 10Combined sources4
Beta strandi15 – 23Combined sources9
Beta strandi31 – 34Combined sources4
Beta strandi38 – 40Combined sources3
Beta strandi50 – 58Combined sources9
Beta strandi60 – 64Combined sources5
Beta strandi72 – 76Combined sources5
Beta strandi84 – 86Combined sources3
Beta strandi88 – 93Combined sources6
Beta strandi95 – 99Combined sources5
Beta strandi105 – 108Combined sources4
Beta strandi112 – 114Combined sources3
Helixi117 – 120Combined sources4
Helixi124 – 129Combined sources6
Beta strandi131 – 133Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GS2model-I3-133[»]
1NKWX-ray3.10I1-134[»]
1NWXX-ray3.50I1-134[»]
1NWYX-ray3.30I1-134[»]
1SM1X-ray3.42I1-134[»]
1XBPX-ray3.50I1-134[»]
2ZJPX-ray3.70H1-134[»]
2ZJQX-ray3.30H1-134[»]
2ZJRX-ray2.91H1-134[»]
3CF5X-ray3.30H1-134[»]
3DLLX-ray3.50H1-134[»]
3PIOX-ray3.25H1-134[»]
3PIPX-ray3.45H1-134[»]
4IO9X-ray3.20H1-134[»]
4IOAX-ray3.20H1-134[»]
4IOCX-ray3.60H1-134[»]
4U67X-ray3.65H1-134[»]
4V49X-ray8.70I2-133[»]
4V4AX-ray9.50I2-133[»]
4V4GX-ray11.50L2-133[»]
4WFNX-ray3.54H1-134[»]
5DM6X-ray2.90H1-134[»]
5DM7X-ray3.00H1-134[»]
ProteinModelPortaliQ9RXJ2.
SMRiQ9RXJ2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RXJ2.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L14P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
HOGENOMiHOG000183702.
InParanoidiQ9RXJ2.
KOiK02874.
OMAiLRDKQFM.
OrthoDBiPOG091H00C5.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14. 1 hit.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RXJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIMPQSRLDV ADNSGAREIM CIRVLNSGIG GKGLTTGGGG NKRYAHVGDI
60 70 80 90 100
IVASVKDAAP RGAVKAGDVV KAVVVRTSHA IKRADGSTIR FDRNAAVIIN
110 120 130
NQGEPRGTRV FGPVARELRD RRFMKIVSLA PEVL
Length:134
Mass (Da):14,232
Last modified:May 1, 2000 - v1
Checksum:iA28B8DF0FD84100F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF09902.1.
PIRiA75535.
RefSeqiNP_294044.1. NC_001263.1.
WP_010886966.1. NZ_CP015081.1.

Genome annotation databases

EnsemblBacteriaiAAF09902; AAF09902; DR_0321.
GeneIDi1797713.
KEGGidra:DR_0321.
PATRICi21628140. VBIDeiRad64572_0487.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF09902.1.
PIRiA75535.
RefSeqiNP_294044.1. NC_001263.1.
WP_010886966.1. NZ_CP015081.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GS2model-I3-133[»]
1NKWX-ray3.10I1-134[»]
1NWXX-ray3.50I1-134[»]
1NWYX-ray3.30I1-134[»]
1SM1X-ray3.42I1-134[»]
1XBPX-ray3.50I1-134[»]
2ZJPX-ray3.70H1-134[»]
2ZJQX-ray3.30H1-134[»]
2ZJRX-ray2.91H1-134[»]
3CF5X-ray3.30H1-134[»]
3DLLX-ray3.50H1-134[»]
3PIOX-ray3.25H1-134[»]
3PIPX-ray3.45H1-134[»]
4IO9X-ray3.20H1-134[»]
4IOAX-ray3.20H1-134[»]
4IOCX-ray3.60H1-134[»]
4U67X-ray3.65H1-134[»]
4V49X-ray8.70I2-133[»]
4V4AX-ray9.50I2-133[»]
4V4GX-ray11.50L2-133[»]
4WFNX-ray3.54H1-134[»]
5DM6X-ray2.90H1-134[»]
5DM7X-ray3.00H1-134[»]
ProteinModelPortaliQ9RXJ2.
SMRiQ9RXJ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_0321.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF09902; AAF09902; DR_0321.
GeneIDi1797713.
KEGGidra:DR_0321.
PATRICi21628140. VBIDeiRad64572_0487.

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
HOGENOMiHOG000183702.
InParanoidiQ9RXJ2.
KOiK02874.
OMAiLRDKQFM.
OrthoDBiPOG091H00C5.

Miscellaneous databases

EvolutionaryTraceiQ9RXJ2.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14. 1 hit.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL14_DEIRA
AccessioniPrimary (citable) accession number: Q9RXJ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2004
Last sequence update: May 1, 2000
Last modified: November 2, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.