Sensory box/GGDEF family protein - Deinococcus radiodurans

Preferred order of sections

Names and origin

Protein names

Submitted name:
Sensory box/GGDEF family protein EMBL AAF10046.1

Gene names

Ordered Locus Names:

DR_0466

Organism

Deinococcus radiodurans

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	805 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q9RX49 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: B0289390F5272C41
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FASTA

805

89,982

        10         20         30         40         50         60 
MTLCSGRPRP PGRDEAPTSM PSSVPNLDQL LQQAGLSTEV PPSLGEWQNL LWRVRAALDR 

        70         80         90        100        110        120 
GRDAAQATGW AQHLLDKLSL PVLVLDRQGT VIHASEACGA LGWSHDLRGR PLAELLSSPL 

       130        140        150        160        170        180 
EDLRLSNLLK RVWQGERLHQ VPLSLRHTEG RLQLAEASLL PLHAASGEST AAYVAMSITT 

       190        200        210        220        230        240 
TELHGQSDDN ARTDRQYFYE SLLAALPASL AVLGPDQRYR FCNPAAIGNP QIREWIMGHT 

       250        260        270        280        290        300 
DAEYVAERGF PPELATERGR HMDEAARERK TVQFEERMLR PDGEPVYQLR NYTPLFDENG 

       310        320        330        340        350        360 
ELLLYLGHGV DVTELRRTQE ALRELNAQLE ERVEARTAEL EALSRQLQHD ALHDSLTGLP 

       370        380        390        400        410        420 
NRALFSDRLS QAIARSKLPG GPQYAVLFLD VDRFKGINDT LGHPTGDAML VEMARRLRAC 

       430        440        450        460        470        480 
LRATDTVARL GGDEFTILLE PLQSTEQAAQ VAARIQDALR RPMQMPAAGP GGLPGGWHQV 

       490        500        510        520        530        540 
TMSASLGIVH SQPDYDSAMA VLRDADIAMY RAKDGGRAKY RVFTPEMREH ILHVNRMEHE 

       550        560        570        580        590        600 
LRRALAADEL RVRYQPVLDL DRGRIEGFEA LVRWQHPERG LLGPDDFTPI AEESGLLPDI 

       610        620        630        640        650        660 
DRWVLARACR ELVQWQRLYP HDPPLHLSVN FCSQHLAAPD VHERVKELLQ RTGFDPGRLN 

       670        680        690        700        710        720 
LEITESSLLS QTGDVQRNME RLRQLGVRLH LDDFGTGYSS LSYLQLYPID VLKIDRSFVQ 

       730        740        750        760        770        780 
GMLDNDSNAE LVRTIVAMAK NLNLKVVAEG IEDPRQLAAL RGLGCDAGQG FLFSPALDVH 

       790        800 
AARTLVAEGQ HHRRPGWRYD DLPPA

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References

[1]

"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1."
White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P.

Fraser C.M.
Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000513 Genomic DNA. Translation: AAF10046.1.
PIR	B75515.
RefSeq	NP_294189.1. NC_001263.1.
3D structure databases
ProteinModelPortal	Q9RX49.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1800173.
GenomeReviews	Gene locus DR_0466 in contig AE000513_GR.
KEGG	dra:DR_0466.
NMPDR	fig\|243230.1.peg.648.
PATRIC	21628456. VBIDeiRad64572_0644.
TIGR	DR_0466.
Phylogenomic databases
OMA	HASEACG.
PhylomeDB	Q9RX49.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013656. PAS_4. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF08448. PAS_4. 2 hits. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9RX49_DEIRA

Accession

Primary (citable) accession number: Q9RX49

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information