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Protein
Submitted name:

G/U mismatch-specific DNA glycosylase

Gene

DR_0715

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDRAD243230:GH46-736-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
G/U mismatch-specific DNA glycosylaseImported
Gene namesi
Ordered Locus Names:DR_0715Imported
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)Imported
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi243230.DR_0715.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2C2PX-ray1.75A1-199[»]
2C2QX-ray1.70A1-199[»]
ProteinModelPortaliQ9RWF4.
SMRiQ9RWF4. Positions 7-189.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RWF4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 175156UDGInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108VCA. Bacteria.
COG3663. LUCA.
HOGENOMiHOG000264684.
InParanoidiQ9RWF4.
KOiK03649.
OMAiYYAHPGN.
OrthoDBiEOG68H872.

Family and domain databases

Gene3Di3.40.470.10. 1 hit.
InterProiIPR015637. MUG/TDG.
IPR005122. Uracil-DNA_glycosylase-like.
[Graphical view]
PANTHERiPTHR12159. PTHR12159. 1 hit.
PfamiPF03167. UDG. 1 hit.
[Graphical view]
SUPFAMiSSF52141. SSF52141. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9RWF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAPHDVPDL TGSGEYLVPD VLQPGLTLVL VGTAPSGISA RARAYYANPE
60 70 80 90 100
NKFWRTLHAV GLTPRQLVPQ EYATLPQYGL GLTDVAKRHS GVDAALPGEA
110 120 130 140 150
WRPDELRRKV EHYRPRIVAF TSKRGASETL GVPTGKLPYG PQPQPLDWPA
160 170 180 190
ETELWVLPST SPLGHNHFRL EPWQALGDRV RELRGAAEAG NPSPETPVL
Length:199
Mass (Da):21,760
Last modified:May 1, 2000 - v1
Checksum:i4D25BBF78C1D48FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10293.1.
PIRiE75483.
RefSeqiNP_294438.1. NC_001263.1.
WP_010887360.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF10293; AAF10293; DR_0715.
GeneIDi1797244.
KEGGidra:DR_0715.
PATRICi21628974. VBIDeiRad64572_0893.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10293.1.
PIRiE75483.
RefSeqiNP_294438.1. NC_001263.1.
WP_010887360.1. NC_001263.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2C2PX-ray1.75A1-199[»]
2C2QX-ray1.70A1-199[»]
ProteinModelPortaliQ9RWF4.
SMRiQ9RWF4. Positions 7-189.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_0715.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF10293; AAF10293; DR_0715.
GeneIDi1797244.
KEGGidra:DR_0715.
PATRICi21628974. VBIDeiRad64572_0893.

Phylogenomic databases

eggNOGiENOG4108VCA. Bacteria.
COG3663. LUCA.
HOGENOMiHOG000264684.
InParanoidiQ9RWF4.
KOiK03649.
OMAiYYAHPGN.
OrthoDBiEOG68H872.

Enzyme and pathway databases

BioCyciDRAD243230:GH46-736-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9RWF4.

Family and domain databases

Gene3Di3.40.470.10. 1 hit.
InterProiIPR015637. MUG/TDG.
IPR005122. Uracil-DNA_glycosylase-like.
[Graphical view]
PANTHERiPTHR12159. PTHR12159. 1 hit.
PfamiPF03167. UDG. 1 hit.
[Graphical view]
SUPFAMiSSF52141. SSF52141. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422Imported.
  2. "The crystal structure of mismatch-specific uracil-DNA glycosylase (MUG) from Deinococcus radiodurans reveals a novel catalytic residue and broad substrate specificity."
    Moe E., Leiros I., Smalas A.O., McSweeney S.
    J. Biol. Chem. 281:569-577(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS).

Entry informationi

Entry nameiQ9RWF4_DEIRA
AccessioniPrimary (citable) accession number: Q9RWF4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 11, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.