Sensory box/GGDEF family protein - Deinococcus radiodurans

Preferred order of sections

Names and origin

Protein names

Submitted name:
Sensory box/GGDEF family protein EMBL AAF10326.1

Gene names

Ordered Locus Names:

DR_0750

Organism

Deinococcus radiodurans

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	939 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q9RWB9 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 65A1BCA03224BB3D
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FASTA

939

99,776

        10         20         30         40         50         60 
MHEDRKRRRG KLRTAVHFKA PRRARFSRFP LFPRLNPMPA APTDAHAALP IALRDLIRLH 

        70         80         90        100        110        120 
APQATLLAAI GQRILNIQAE GAPTEEAQLV PPDDWLEHGD LAWITRDGAL LGLLWSDGAP 

       130        140        150        160        170        180 
VPDGAVQVLT LLLSAASAEG ASREADMLIT QLPAATAWLS AELEFRQVSR TFLELFGLTG 

       190        200        210        220        230        240 
ADVLGRTVHE VFPDHAALAQ QLDSAAAGRA VQLGDERVPS LPGHSGERWL RGSARPYFGG 

       250        260        270        280        290        300 
AAAGVLWTVQ DVSTEHTQTT QFAALLGTDL PLALLGPGGA VQGASRGMRQ LLGEPEDLAE 

       310        320        330        340        350        360 
AQAHPQRPLH EWPCWAPAGA RLLQDLIQSA EAGRPSPVPS EIALARGGQL PLLVRRSDTV 

       370        380        390        400        410        420 
PGLLLAEGVR PAAVSEDNGA ARLLHLSGAA TILLDPQGRV QLISEPAARL LGFDPHNIAL 

       430        440        450        460        470        480 
TGLPLPRLHQ QLGIKLHTPQ GNPLTVPPLS ALTLPHNGEV LAVLPGGVTR HLEISLSALP 

       490        500        510        520        530        540 
GSGQSTGSSA ASPGRSAAPE LLLSLRDVTT LRRAQAKLRH DASHDGLTGL LNRSGLRAAL 

       550        560        570        580        590        600 
GQATAAQTGG MVACLDIDGF GGLNAALSRT AGDLLLIQVA ARLNDLAELE GGQAARLADD 

       610        620        630        640        650        660 
TFAVYLPQLG AAVGGQKLQA ALREPLRTGK RLVPVTFSLG AAPLLAAAPE QALADAEVAL 

       670        680        690        700        710        720 
QHARRQGRGQ LTVFEPDMRA EEAQTFELED QLRAVLDRGL QHEQFSLLYQ PAVSLKDGRV 

       730        740        750        760        770        780 
LGAEALLRWT HPELGNVSPA RFLPLAQRSD LITSIGEWVV REAVQGRTQL RDATGQRNWR 

       790        800        810        820        830        840 
TSVNLSLEEL RREGAIERLL PLITRPSALD IEVSASSLLD HSEETLGLLD ALRARGARLI 

       850        860        870        880        890        900 
VDDFGDGASS LTALTQFPLY GVKLHPTLTT RLPGDQKSLK LVQGTVSLAH SLGLTVTAVG 

       910        920        930 
VETYAQLDML RDLGCDAAQG YALTPPLSAG DLVTWVQGR

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References

[1]

"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1."
White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P.

Fraser C.M.
Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000513 Genomic DNA. Translation: AAF10326.1.
PIR	G75481.
RefSeq	NP_294474.1. NC_001263.1.
3D structure databases
ProteinModelPortal	Q9RWB9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1799689.
GenomeReviews	Gene locus DR_0750 in contig AE000513_GR.
KEGG	dra:DR_0750.
NMPDR	fig\|243230.1.peg.933.
PATRIC	21629046. VBIDeiRad64572_0929.
TIGR	DR_0750.
Phylogenomic databases
HOGENOM	HBG450161.
OMA	VKLHPTL.
ProtClustDB	CLSK2460248.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. IPR000014. PAS. IPR013656. PAS_4. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00091. PAS. 3 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9RWB9_DEIRA

Accession

Primary (citable) accession number: Q9RWB9

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information