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Q9RW24

- RPIA_DEIRA

UniProt

Q9RW24 - RPIA_DEIRA

Protein

Ribose-5-phosphate isomerase A

Gene

rpiA

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.UniRule annotation

    Catalytic activityi

    D-ribose 5-phosphate = D-ribulose 5-phosphate.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei106 – 1061Proton acceptorUniRule annotation
    Binding sitei124 – 1241SubstrateUniRule annotation

    GO - Molecular functioni

    1. ribose-5-phosphate isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pentose-phosphate shunt, non-oxidative branch Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Isomerase

    Enzyme and pathway databases

    BioCyciDRAD243230:GH46-867-MONOMER.
    UniPathwayiUPA00115; UER00412.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribose-5-phosphate isomerase AUniRule annotation (EC:5.3.1.6UniRule annotation)
    Alternative name(s):
    Phosphoriboisomerase AUniRule annotation
    Short name:
    PRIUniRule annotation
    Gene namesi
    Name:rpiAUniRule annotation
    Ordered Locus Names:DR_0845
    OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
    Taxonomic identifieri243230 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
    ProteomesiUP000002524: Chromosome I

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 226226Ribose-5-phosphate isomerase APRO_0000158411Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    STRINGi243230.DR_0845.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9RW24.
    SMRiQ9RW24. Positions 3-225.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni28 – 314Substrate bindingUniRule annotation
    Regioni84 – 874Substrate bindingUniRule annotation
    Regioni97 – 1004Substrate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the ribose 5-phosphate isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0120.
    HOGENOMiHOG000276369.
    KOiK01807.
    OMAiMDQLEMK.
    OrthoDBiEOG67MF61.

    Family and domain databases

    HAMAPiMF_00170. Rib_5P_isom_A.
    InterProiIPR004788. Ribose5P_isomerase_typA.
    IPR020672. Ribose5P_isomerase_typA_subgr.
    [Graphical view]
    PANTHERiPTHR11934. PTHR11934. 1 hit.
    PfamiPF06026. Rib_5-P_isom_A. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00021. rpiA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9RW24-1 [UniParc]FASTAAdd to Basket

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    MDLEALKKEA ALRSVALVQS GQRVGLGTGS TAKYAIEELG RKLAAGELSG    50
    IVGVSTSEAS EKLAREVGIP TEPLDPRPLD IAIDGADEIA PNLDLVKGLG 100
    GALVREKMTE VQAKRLIIIA DHTKLVTRLG EKAPLPIEIV PFGFLSTIER 150
    LREFLPGGRL RQPGAQPYVT DNGNYIFDAQ LPAEFDAREL ERRIKGTLGV 200
    VDTGLFLGMA ERAFVAAPDG VQELTR 226
    Length:226
    Mass (Da):24,236
    Last modified:May 1, 2000 - v1
    Checksum:i935A49012F19A11C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000513 Genomic DNA. Translation: AAF10424.1.
    PIRiC75467.
    RefSeqiNP_294569.1. NC_001263.1.

    Genome annotation databases

    EnsemblBacteriaiAAF10424; AAF10424; DR_0845.
    GeneIDi1799561.
    KEGGidra:DR_0845.
    PATRICi21629244. VBIDeiRad64572_1028.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000513 Genomic DNA. Translation: AAF10424.1 .
    PIRi C75467.
    RefSeqi NP_294569.1. NC_001263.1.

    3D structure databases

    ProteinModelPortali Q9RW24.
    SMRi Q9RW24. Positions 3-225.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243230.DR_0845.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAF10424 ; AAF10424 ; DR_0845 .
    GeneIDi 1799561.
    KEGGi dra:DR_0845.
    PATRICi 21629244. VBIDeiRad64572_1028.

    Phylogenomic databases

    eggNOGi COG0120.
    HOGENOMi HOG000276369.
    KOi K01807.
    OMAi MDQLEMK.
    OrthoDBi EOG67MF61.

    Enzyme and pathway databases

    UniPathwayi UPA00115 ; UER00412 .
    BioCyci DRAD243230:GH46-867-MONOMER.

    Family and domain databases

    HAMAPi MF_00170. Rib_5P_isom_A.
    InterProi IPR004788. Ribose5P_isomerase_typA.
    IPR020672. Ribose5P_isomerase_typA_subgr.
    [Graphical view ]
    PANTHERi PTHR11934. PTHR11934. 1 hit.
    Pfami PF06026. Rib_5-P_isom_A. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00021. rpiA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

    Entry informationi

    Entry nameiRPIA_DEIRA
    AccessioniPrimary (citable) accession number: Q9RW24
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 16, 2004
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3