MutT/nudix family protein - Deinococcus radiodurans

Preferred order of sections

Names and origin

Protein names

Submitted name:
MutT/nudix family protein EMBL AAF10599.1

Gene names

Ordered Locus Names:

DR_1025

Organism

Deinococcus radiodurans

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	159 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the Nudix hydrolase family. RuleBase RU003476

Contains 1 nudix hydrolase domain. SAAS SAAS020476

Ontologies

Keywords
Ligand	ATP-binding PDB 1SU2 Nucleotide-binding
Molecular function	Hydrolase RuleBase RU003476 SAAS SAAS020476
Technical term	3D-structure PDB 1SJY PDB 1SU2 PDB 1SOI PDB 1SZ3 Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Regions

Nucleotide binding

1 – 6

6

ATP PDB 1SU2

Nucleotide binding

50 – 51

2

ATP PDB 1SU2

Nucleotide binding

87 – 89

3

ATP PDB 1SU2

Sequences

Sequence

Length

Mass (Da)

Tools

Q9RVK2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 2D209C7DFC972D82
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FASTA

159

17,569

        10         20         30         40         50         60 
MEHDERTHVP VELRAAGVVL LNERGDILLV QEKGIPGHPE KAGLWHIPSG AVEDGENPQD 

        70         80         90        100        110        120 
AAVREACEET GLRVRPVKFL GAYLGRFPDG VLILRHVWLA EPEPGQTLAP AFTDEIAEAS 

       130        140        150 
FVSREDFAQL YAAGQIRMYQ TKLFYADALR EKGFPALPV

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1." White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P. Fraser C.M. Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.
[2]	"Structural studies of the Nudix hydrolase DR1025 from Deinococcus radiodurans and its ligand complexes." Ranatunga W., Hill E.E., Mooster J.L., Holbrook E.L., Schulze-Gahmen U., Xu W., Bessman M.J., Brenner S.E., Holbrook S.R. J. Mol. Biol. 339:103-116(2004) [PubMed: 15123424] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.39 ANGSTROMS) IN COMPLEX WITH ATP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000513 Genomic DNA. Translation: AAF10599.1.

PIR

C75446.

RefSeq

NP_294749.1. NC_001263.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1SJY	X-ray	1.39	A	1-159	[»]
1SOI	X-ray	1.80	A	1-159	[»]
1SU2	X-ray	1.60	A/B	1-159	[»]
1SZ3	X-ray	1.60	A/B	1-159	[»]

ProteinModelPortal

Q9RVK2.

SMR

Q9RVK2. Positions 1-159.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1799270.

GenomeReviews

Gene locus DR_1025 in contig AE000513_GR.

KEGG

dra:DR_1025.

NMPDR

fig|243230.1.peg.1208.

PATRIC

21629630. VBIDeiRad64572_1217.

TIGR

DR_1025.

Phylogenomic databases

HOGENOM

HBG449841.

OMA

NPQDAAV.

ProtClustDB

CLSK2460266.

Family and domain databases

InterPro

IPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]

Gene3D

G3DSA:3.90.79.10. NUDIX_hydrolase. 1 hit.

Pfam

PF00293. NUDIX. 1 hit.
[Graphical view]

PRINTS

PR00502. NUDIXFAMILY.

SUPFAM

SSF55811. NUDIX_hydrolase. 1 hit.

PROSITE

PS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9RVK2_DEIRA

Accession

Primary (citable) accession number: Q9RVK2

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 74 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)