Q9RV88 (Q9RV88_DEIRA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 13 EMBL AAF10708.1

Gene names

Ordered Locus Names:

DR_1141

Organism

Deinococcus radiodurans

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	498 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAF10708.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9RV88 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 5917C308BFC063A9	FASTA	498	55,492
	10 20 30 40 50 60 MSRPPAILRP AMSEPVSAVP LSAPVTPEWV ADAVFYQIFP DRFARSGRVT GLHLQPWGSA 70 80 90 100 110 120 PTIHGYMGGD LWGVAERLGD LAGLGVNALY FCPVFQSASN HRYHTHDYFQ VDPMLGGNAA 130 140 150 160 170 180 LRHLLDEAHA RGIRVVLDGV FNHASRGFFQ FNDLLEHGEA SAYRDWFHVT GWPLSAYDED 190 200 210 220 230 240 RPANYAAWWG IRALPKFNTD HPEVREFLLS VAEYWMHFGI DGWRLDVPNE IDDDAFWQEF 250 260 270 280 290 300 RRRVKAINPD AYIVGEIWGD AGRWLAGDQF DAVMNYHFTR PCLGFFGART LDHPMNERSG 310 320 330 340 350 360 TGRVEPLDAA AFAVRVEEVT RMYHPAVVRA QLNLLDSHDT ARFLTAVGGD ASAQRLALVF 370 380 390 400 410 420 QFSYVGAPCL YYGDEIGLPG GVDPDCRRAF PWDEPQTWDH DTLTLVRELT AARHRSAALR 430 440 450 460 470 480 RGDFTVLHAQ GEQVSFARKH DGEAAYVAFN CALDAAPVPV PATSGRYRDM LTGAVHDLNE 490 SSVLTLPART AALLLCEG

References

[1]

"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1." White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P. , McDonald L.A., Utterback T.R., Zalewski C., Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D., Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000513 Genomic DNA. Translation: AAF10708.1.
PIR	D75433.
RefSeq	NP_294865.1. NC_001263.1.
3D structure databases
HSSP	HSSP built from PDB template 1EA9 based on UniProtKB Q59226.
ProteinModelPortal	Q9RV88.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1800135.
GenomeReviews	Gene locus DR_1141 in contig AE000513_GR.
KEGG	dra:DR_1141.
NMPDR	fig|243230.1.peg.1324.
PATRIC	21629872. VBIDeiRad64572_1337.
TIGR	DR_1141.
Phylogenomic databases
HOGENOM	HBG726713.
OMA	RAFPWDE.
PhylomeDB	Q9RV88.
ProtClustDB	CLSK444894.
Family and domain databases
InterPro	IPR006048. A-amylase_b_C. IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9RV88_DEIRA

Accession

Primary (citable) accession number: Q9RV88

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)