Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcriptional regulator, MarR family

Gene

DR_1159

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1186-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, MarR familyImported
Gene namesi
Ordered Locus Names:DR_1159Imported
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)Imported
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi243230.DR_1159.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FBKX-ray2.30A/B1-181[»]
5DD8X-ray2.05A/B1-181[»]
ProteinModelPortaliQ9RV71.
SMRiQ9RV71. Positions 8-179.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RV71.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 175136HTH marR-type DNA-bindingInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG1846. LUCA.
HOGENOMiHOG000221447.
InParanoidiQ9RV71.
OMAiMLTSGGM.
OrthoDBiPOG091H06HC.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50995. HTH_MARR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RV71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARMDNDTA ALLERIRSDW ARLNHGQGPD SDGLTPSAGP MLTLLLLERL
60 70 80 90 100
HAALGREIER TYAASGLNAA GWDLLLTLYR SAPPEGLRPT ELSALAAISG
110 120 130 140 150
PSTSNRIVRL LEKGLIERRE DERDRRSASI RLTPQGRALV THLLPAHLAT
160 170 180
TQRVLAPLSA QEQRTLEELA GRMLAGLEQG V
Length:181
Mass (Da):19,711
Last modified:May 1, 2000 - v1
Checksum:i991EA94864BB4087
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10732.1.
PIRiB75430.
RefSeqiNP_294883.1. NC_001263.1.
WP_010887802.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF10732; AAF10732; DR_1159.
GeneIDi1799436.
KEGGidra:DR_1159.
PATRICi21629912. VBIDeiRad64572_1357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10732.1.
PIRiB75430.
RefSeqiNP_294883.1. NC_001263.1.
WP_010887802.1. NC_001263.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FBKX-ray2.30A/B1-181[»]
5DD8X-ray2.05A/B1-181[»]
ProteinModelPortaliQ9RV71.
SMRiQ9RV71. Positions 8-179.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_1159.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF10732; AAF10732; DR_1159.
GeneIDi1799436.
KEGGidra:DR_1159.
PATRICi21629912. VBIDeiRad64572_1357.

Phylogenomic databases

eggNOGiCOG1846. LUCA.
HOGENOMiHOG000221447.
InParanoidiQ9RV71.
OMAiMLTSGGM.
OrthoDBiPOG091H06HC.

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1186-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9RV71.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50995. HTH_MARR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9RV71_DEIRA
AccessioniPrimary (citable) accession number: Q9RV71
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 7, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.