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Q9RUV2 (SODM_DEIRA) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 97. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Mn]

EC=1.15.1.1
Alternative name(s):
MnSOD
Gene names
Name:sodA
Ordered Locus Names:DR_1279
OrganismDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) [Reference proteome] [HAMAP]
Taxonomic identifier243230 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length211 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 manganese ion per subunit By similarity.

Subunit structure

Homodimer By similarity.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.2
Chain2 – 211210Superoxide dismutase [Mn]
PRO_0000160029

Sites

Metal binding271Manganese By similarity
Metal binding811Manganese By similarity
Metal binding1731Manganese By similarity
Metal binding1771Manganese By similarity

Secondary structure

....................................... 211
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q9RUV2 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: A71F22F516A1897E

FASTA21123,478
        10         20         30         40         50         60 
MAYTLPQLPY AYDALEPHID ARTMEIHHTK HHQTYVDNAN KALEGTEFAD LPVEQLIQQL 

        70         80         90        100        110        120 
DRVPADKKGA LRNNAGGHAN HSMFWQIMGQ GQGQNGANQP SGELLDAINS AFGSFDAFKQ 

       130        140        150        160        170        180 
KFEDAAKTRF GSGWAWLVVK DGKLDVVSTA NQDNPLMGEA IAGVSGTPIL GVDVWEHAYY 

       190        200        210 
LNYQNRRPDY LAAFWNVVNW DEVSKRYAAA K 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000513 Genomic DNA. Translation: AAF10851.1.
PIRB75415.
RefSeqNP_295003.1. NC_001263.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1Y67X-ray1.85A/B/C/D2-211[»]
2AW9X-ray2.70A/B2-211[»]
2CDYX-ray2.00A/B/C/D2-211[»]
2CE4X-ray2.20A/B2-211[»]
3KKYX-ray1.80A/B1-211[»]
ProteinModelPortalQ9RUV2.
SMRQ9RUV2. Positions 2-211.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243230.DR_1279.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAF10851; AAF10851; DR_1279.
GeneID1797407.
KEGGdra:DR_1279.
PATRIC21630152. VBIDeiRad64572_1475.

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013583.
KOK04564.
OMAPLPYDYN.
OrthoDBEOG63NMNT.

Enzyme and pathway databases

BioCycDRAD243230:GH46-1308-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ9RUV2.

Entry information

Entry nameSODM_DEIRA
AccessionPrimary (citable) accession number: Q9RUV2
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2003
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 97 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references