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Q9RUP2

- PGK_DEIRA

UniProt

Q9RUP2 - PGK_DEIRA

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Protein

Phosphoglycerate kinase

Gene

pgk

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561SubstrateUniRule annotation
Binding sitei139 – 1391SubstrateUniRule annotation
Binding sitei172 – 1721SubstrateUniRule annotation
Binding sitei222 – 2221ATPUniRule annotation
Binding sitei310 – 3101ATP; via carbonyl oxygenUniRule annotation
Binding sitei341 – 3411ATPUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi369 – 3724ATPUniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. phosphoglycerate kinase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycolytic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Glycolysis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1371-MONOMER.
UniPathwayiUPA00109; UER00185.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoglycerate kinaseUniRule annotation (EC:2.7.2.3UniRule annotation)
Gene namesi
Name:pgkUniRule annotation
Ordered Locus Names:DR_1342
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002524: Chromosome I

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 411411Phosphoglycerate kinasePRO_0000145939Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi243230.DR_1342.

Structurei

3D structure databases

ProteinModelPortaliQ9RUP2.
SMRiQ9RUP2. Positions 23-407.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni41 – 433Substrate bindingUniRule annotation
Regioni79 – 824Substrate bindingUniRule annotation

Sequence similaritiesi

Belongs to the phosphoglycerate kinase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0126.
HOGENOMiHOG000227108.
InParanoidiQ9RUP2.
KOiK00927.
OMAiAGHPVGK.
OrthoDBiEOG64N9Z0.

Family and domain databases

Gene3Di3.40.50.1260. 1 hit.
3.40.50.1270. 1 hit.
HAMAPiMF_00145. Phosphoglyc_kinase.
InterProiIPR001576. Phosphoglycerate_kinase.
IPR015901. Phosphoglycerate_kinase_C.
IPR015911. Phosphoglycerate_kinase_CS.
IPR015824. Phosphoglycerate_kinase_N.
[Graphical view]
PANTHERiPTHR11406. PTHR11406. 1 hit.
PfamiPF00162. PGK. 1 hit.
[Graphical view]
PIRSFiPIRSF000724. Pgk. 1 hit.
PRINTSiPR00477. PHGLYCKINASE.
SUPFAMiSSF53748. SSF53748. 1 hit.
PROSITEiPS00111. PGLYCERATE_KINASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RUP2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTGLCPLHQP SPLDHPHSGG TPMQNLSQLD VKGKRVLVRV DYNVPVGDGV
60 70 80 90 100
VQDDTRITAS VPTIKKLLDG GASVVLMSHF GRPKNGPEDK YSLKPVAEAV
110 120 130 140 150
SRALGQDVKF IPSLPGSDET LQAVQALRPG EVALLENVRF EAGEEKNDAA
160 170 180 190 200
LNDKLAKLGD AFVLDAFGSA HRAHSSVSGV AGKLPHAAGG LLQSEVDALG
210 220 230 240 250
KLLHAPEHPY VVIIGGAKVS DKIKVIENLL PKVDRMLIGG GMMFTFIKAR
260 270 280 290 300
GGQIGNSLVE DDQLDLAKGL LEKYGDKLLL PTDAVAADKF AADAQSKVVP
310 320 330 340 350
ADQIPDGWMG LDIGPDTQRA YADALQGAKT VFWNGPMGVF EFDQFAAGTN
360 370 380 390 400
AVAAAVGSLK DQAYTVVGGG DSVSAINKSG KADQIDHIST GGGASLELLE
410
GKELPGVVAM A
Length:411
Mass (Da):42,899
Last modified:May 1, 2000 - v1
Checksum:i39407D5EC7E34D37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10913.1.
PIRiD75408.
RefSeqiNP_295065.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF10913; AAF10913; DR_1342.
GeneIDi1799396.
KEGGidra:DR_1342.
PATRICi21630282. VBIDeiRad64572_1539.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF10913.1 .
PIRi D75408.
RefSeqi NP_295065.1. NC_001263.1.

3D structure databases

ProteinModelPortali Q9RUP2.
SMRi Q9RUP2. Positions 23-407.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243230.DR_1342.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF10913 ; AAF10913 ; DR_1342 .
GeneIDi 1799396.
KEGGi dra:DR_1342.
PATRICi 21630282. VBIDeiRad64572_1539.

Phylogenomic databases

eggNOGi COG0126.
HOGENOMi HOG000227108.
InParanoidi Q9RUP2.
KOi K00927.
OMAi AGHPVGK.
OrthoDBi EOG64N9Z0.

Enzyme and pathway databases

UniPathwayi UPA00109 ; UER00185 .
BioCyci DRAD243230:GH46-1371-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1260. 1 hit.
3.40.50.1270. 1 hit.
HAMAPi MF_00145. Phosphoglyc_kinase.
InterProi IPR001576. Phosphoglycerate_kinase.
IPR015901. Phosphoglycerate_kinase_C.
IPR015911. Phosphoglycerate_kinase_CS.
IPR015824. Phosphoglycerate_kinase_N.
[Graphical view ]
PANTHERi PTHR11406. PTHR11406. 1 hit.
Pfami PF00162. PGK. 1 hit.
[Graphical view ]
PIRSFi PIRSF000724. Pgk. 1 hit.
PRINTSi PR00477. PHGLYCKINASE.
SUPFAMi SSF53748. SSF53748. 1 hit.
PROSITEi PS00111. PGLYCERATE_KINASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Entry informationi

Entry nameiPGK_DEIRA
AccessioniPrimary (citable) accession number: Q9RUP2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: May 1, 2000
Last modified: November 26, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3