Reviewed, UniProtKB/Swiss-Prot Q9RUL6 (Y1368_DEIRA)

Names and origin

Protein names

Recommended name:
    UPF0001 protein DR_1368

Gene names

Ordered Locus Names:

DR_1368

Organism

Deinococcus radiodurans [Complete proteome] [HAMAP]

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	209 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 209	209	UPF0001 protein DR_1368		PRO_0000163195
Amino acid modifications
	Modified residue	31	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q9RUL6-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: E7B42D23D9E82B2B	FASTA	209	22,235
	10 20 30 40 50 60 MSVPAVLAGI REAEAQAGRA AGTVRLVAVT KGHSLDEIRG QVLAHGDFPL AENRGQELRD 70 80 90 100 110 120 KVAGLPGAEW HFIGPLQRNK IKYLRGVTLV HSIEEPWQAQ AIADAAAEWG QAPAVLLQRH 130 140 150 160 170 180 NGEGQKHGVL PDDLPAVLRE VRATGLEVRG LMAMAPYDDE ARAAQVFADT ARQAQDLGLV 190 200 ELSMGMSGDY PLAVAAGATL VRVGRSLFA

References

[1]

"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1." White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P. , McDonald L.A., Utterback T.R., Zalewski C., Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D., Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13939 / DSM 20539 / IFO 15346 / LMG 4051 / NCIB 9279 / R1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE000513 Genomic DNA. Translation: AAF10940.1.
PIR	A75403.
RefSeq	NP_295091.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1799069.
GenomeReviews	Gene locus DR_1368 in contig AE000513_GR.
KEGG	dra:DR_1368.
NMPDR	fig|243230.1.peg.1550.
TIGR	DR_1368.
Phylogenomic databases
HOGENOM	Q9RUL6.
OMA	MCIPPAA
Enzyme and pathway databases
BioCyc	DRAD243230:DR_1368-MON.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. Prd-pyrdxlP-dep_enz_YBL036C. [Graphical view]
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. PP_YBL036C. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y1368_DEIRA

Accession

Primary (citable) accession number: Q9RUL6

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 11, 2001
Last sequence update:	May 1, 2000
Last modified:	November 24, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)