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Q9RU48 (SODC_DEIRA) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 102. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn]

EC=1.15.1.1
Gene names
Name:sodC
Ordered Locus Names:DR_1546
OrganismDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) [Reference proteome] [HAMAP]
Taxonomic identifier243230 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length182 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 copper ion per subunit Potential.

Binds 1 zinc ion per subunit Potential.

Subcellular location

Cell membrane; Lipid-anchor Potential.

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family.

Caution

Lacks the last conserved histidine that binds copper.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential
Chain20 – 182163Superoxide dismutase [Cu-Zn]
PRO_0000032841

Sites

Metal binding691Copper; catalytic By similarity
Metal binding711Copper; catalytic By similarity
Metal binding951Copper; catalytic By similarity
Metal binding951Zinc; structural By similarity
Metal binding1041Zinc; structural By similarity
Metal binding1151Zinc; structural By similarity
Metal binding1181Zinc; structural By similarity

Amino acid modifications

Lipidation201N-palmitoyl cysteine Potential
Lipidation201S-diacylglycerol cysteine Potential
Disulfide bond76 ↔ 175 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9RU48 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 96749572F393CA1A

FASTA18218,787
        10         20         30         40         50         60 
MFRTLTVVPL LALGLSLSAC ADLGQPTVRA DLLDQTGKVT GTATFSPSPI GTRVSIEVSG 

        70         80         90        100        110        120 
LKAGPHGLHI HENPNCNPGP DAQGQTIPFG AAGGHFDPGA SHNHDGPHAR NDQGHGGDLP 

       130        140        150        160        170        180 
MITVGEDGKG RLNFDTNRLK MTGPTGVLGR SIVIHADADD YQTNPAGNSG GRERCGVFQA 


IN 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000513 Genomic DNA. Translation: AAF11107.1.
PIRB75383.
RefSeqNP_295269.1. NC_001263.1.

3D structure databases

ProteinModelPortalQ9RU48.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243230.DR_1546.

Proteomic databases

PRIDEQ9RU48.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAF11107; AAF11107; DR_1546.
GeneID1797544.
KEGGdra:DR_1546.
PATRIC21630704. VBIDeiRad64572_1748.

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263448.
KOK04565.
OMAEIEVKLH.
OrthoDBEOG6K13RS.

Enzyme and pathway databases

BioCycDRAD243230:GH46-1576-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSODC_DEIRA
AccessionPrimary (citable) accession number: Q9RU48
Entry history
Integrated into UniProtKB/Swiss-Prot: August 30, 2002
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families