SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9RU48

- SODC_DEIRA

UniProt

Q9RU48 - SODC_DEIRA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Superoxide dismutase [Cu-Zn]
Gene
sodC, DR_1546
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Cofactori

Binds 1 copper ion per subunit Reviewed prediction.
Binds 1 zinc ion per subunit Reviewed prediction.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi69 – 691Copper; catalytic By similarity
Metal bindingi71 – 711Copper; catalytic By similarity
Metal bindingi95 – 951Copper; catalytic By similarity
Metal bindingi95 – 951Zinc; structural By similarity
Metal bindingi104 – 1041Zinc; structural By similarity
Metal bindingi115 – 1151Zinc; structural By similarity
Metal bindingi118 – 1181Zinc; structural By similarity

GO - Molecular functioni

  1. copper ion binding Source: RefGenome
  2. superoxide dismutase activity Source: RefGenome
  3. zinc ion binding Source: RefGenome

GO - Biological processi

  1. removal of superoxide radicals Source: RefGenome
Complete GO annotation...

Keywords - Molecular functioni

Antioxidant, Oxidoreductase

Keywords - Ligandi

Copper, Metal-binding, Zinc

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1576-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn] (EC:1.15.1.1)
Gene namesi
Name:sodC
Ordered Locus Names:DR_1546
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002524: Chromosome I

Subcellular locationi

Cell membrane; Lipid-anchor Reviewed prediction

GO - Cellular componenti

  1. periplasmic space Source: RefGenome
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 Reviewed prediction
Add
BLAST
Chaini20 – 182163Superoxide dismutase [Cu-Zn]
PRO_0000032841Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi20 – 201N-palmitoyl cysteine Reviewed prediction
Lipidationi20 – 201S-diacylglycerol cysteine Reviewed prediction
Disulfide bondi76 ↔ 175 By similarity

Keywords - PTMi

Disulfide bond, Lipoprotein, Palmitate

Proteomic databases

PRIDEiQ9RU48.

Interactioni

Protein-protein interaction databases

STRINGi243230.DR_1546.

Structurei

3D structure databases

ProteinModelPortaliQ9RU48.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiEIEVKLH.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9RU48-1 [UniParc]FASTAAdd to Basket

« Hide

MFRTLTVVPL LALGLSLSAC ADLGQPTVRA DLLDQTGKVT GTATFSPSPI    50
GTRVSIEVSG LKAGPHGLHI HENPNCNPGP DAQGQTIPFG AAGGHFDPGA 100
SHNHDGPHAR NDQGHGGDLP MITVGEDGKG RLNFDTNRLK MTGPTGVLGR 150
SIVIHADADD YQTNPAGNSG GRERCGVFQA IN 182
Length:182
Mass (Da):18,787
Last modified:May 1, 2000 - v1
Checksum:i96749572F393CA1A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000513 Genomic DNA. Translation: AAF11107.1.
PIRiB75383.
RefSeqiNP_295269.1. NC_001263.1.
WP_010888185.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF11107; AAF11107; DR_1546.
GeneIDi1797544.
KEGGidra:DR_1546.
PATRICi21630704. VBIDeiRad64572_1748.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000513 Genomic DNA. Translation: AAF11107.1 .
PIRi B75383.
RefSeqi NP_295269.1. NC_001263.1.
WP_010888185.1. NC_001263.1.

3D structure databases

ProteinModelPortali Q9RU48.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243230.DR_1546.

Proteomic databases

PRIDEi Q9RU48.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF11107 ; AAF11107 ; DR_1546 .
GeneIDi 1797544.
KEGGi dra:DR_1546.
PATRICi 21630704. VBIDeiRad64572_1748.

Phylogenomic databases

eggNOGi COG2032.
HOGENOMi HOG000263448.
KOi K04565.
OMAi EIEVKLH.
OrthoDBi EOG6K13RS.

Enzyme and pathway databases

BioCyci DRAD243230:GH46-1576-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Entry informationi

Entry nameiSODC_DEIRA
AccessioniPrimary (citable) accession number: Q9RU48
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2002
Last sequence update: May 1, 2000
Last modified: September 3, 2014
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Lacks the last conserved histidine that binds copper.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi