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Q9RTB7

- GLGB_DEIRA

UniProt

Q9RTB7 - GLGB_DEIRA

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei309 – 3091NucleophileUniRule annotation
Active sitei360 – 3601Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1880-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:DR_1848
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002524: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7057051,4-alpha-glucan branching enzyme GlgBPRO_0000188700Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi243230.DR_1848.

Structurei

3D structure databases

ProteinModelPortaliQ9RTB7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
InParanoidiQ9RTB7.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9RTB7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTFPLPLDHE HLQKLVTADL VRPDHLLGAH PTTEHGVQGV RFAVWAPNAQ
60 70 80 90 100
HVSVVGDFND WNGFDHPLQR LDFGFWGAFV PAAQPGQRYK FRVTGAGGQT
110 120 130 140 150
VDKTDPYGTF FEVRPNNASI IWQQDFEWTD AGWLEQRARR GQALEDPISI
160 170 180 190 200
YECHVGSWAR RDDGWFLNYR DLAHRLGEYV TYMGYTHVEL LGVMEHPFDG
210 220 230 240 250
SWGYQVTGYY APTSRLGSPE DFKYLVNHLH SLGIGVLLDW VPGHFPTDEF
260 270 280 290 300
ALAHFDGSPL YEYADPRKGY HYDWNTYIFD YGRNEVVMFL IGSALKWVQD
310 320 330 340 350
YHVDGLRVDA VASMLYLDFS RTEWVPNIYG GRENLEAIAF LKRLNEVAHH
360 370 380 390 400
MAPGCLMIAE ESTSFPGVTT PTPEGLGFDY KWAMGWMNDS LAYFEQDPIY
410 420 430 440 450
RKYDHHKLTF FNVYRTSENY VLAISHDEVV HLKKPMVLKH PGDWYAQRAD
460 470 480 490 500
YRAFLAMMWT TPGKKLLFMG QDFAQGSEWN HDAPLPWFHA DQPDHRGVMN
510 520 530 540 550
LVRRLNELYR ERPDWHTGDA REEGMAWISA DDTDNSVYAY ARRDTYSGAW
560 570 580 590 600
SLVIANLTPV YREDYVIGVP QGGEYRVLLS TDDGEFGGFG TQQPDLSARD
610 620 630 640 650
EAAHGQAHAL HLNLPPSSVL VLEPVAAAPV KGLVSRQELT PELREVARQS
660 670 680 690 700
AQAVQVERAA DPRPNEQQRL VAETPAHEGG RSAPADAAES AEQKPDDEQK

GGKKA
Length:705
Mass (Da):80,006
Last modified:May 1, 2000 - v1
Checksum:i6122BD1961CE6230
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000513 Genomic DNA. Translation: AAF11402.1.
PIRiD75345.
RefSeqiNP_295571.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF11402; AAF11402; DR_1848.
GeneIDi1798355.
KEGGidra:DR_1848.
PATRICi21631334. VBIDeiRad64572_2061.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000513 Genomic DNA. Translation: AAF11402.1 .
PIRi D75345.
RefSeqi NP_295571.1. NC_001263.1.

3D structure databases

ProteinModelPortali Q9RTB7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243230.DR_1848.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF11402 ; AAF11402 ; DR_1848 .
GeneIDi 1798355.
KEGGi dra:DR_1848.
PATRICi 21631334. VBIDeiRad64572_2061.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
InParanoidi Q9RTB7.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci DRAD243230:GH46-1880-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Entry informationi

Entry nameiGLGB_DEIRA
AccessioniPrimary (citable) accession number: Q9RTB7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: May 1, 2000
Last modified: October 29, 2014
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3