Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Lactate utilization protein C

Gene

lutC

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May function in L-lactate utilization.

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1942-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Lactate utilization protein C
Gene namesi
Name:lutC
Ordered Locus Names:DR_1909
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 212212Lactate utilization protein CPRO_0000429361Add
BLAST

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi243230.DR_1909.

Structurei

Secondary structure

1
212
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi41 – 5414Combined sources
Beta strandi58 – 625Combined sources
Turni64 – 663Combined sources
Helixi67 – 759Combined sources
Beta strandi80 – 823Combined sources
Helixi89 – 913Combined sources
Beta strandi97 – 993Combined sources
Helixi107 – 1126Combined sources
Beta strandi114 – 1185Combined sources
Beta strandi121 – 1244Combined sources
Turni125 – 1284Combined sources
Beta strandi129 – 1324Combined sources
Turni136 – 1383Combined sources
Helixi141 – 1444Combined sources
Beta strandi146 – 15510Combined sources
Helixi156 – 1583Combined sources
Beta strandi159 – 1624Combined sources
Helixi163 – 17513Combined sources
Beta strandi181 – 1844Combined sources
Beta strandi204 – 2118Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2G40X-ray1.70A1-212[»]
ProteinModelPortaliQ9RT57.
SMRiQ9RT57. Positions 38-212.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RT57.

Family & Domainsi

Sequence similaritiesi

Belongs to the LutC/YkgG family.Curated

Phylogenomic databases

eggNOGiENOG41080R8. Bacteria.
COG1556. LUCA.
HOGENOMiHOG000257978.
InParanoidiQ9RT57.
KOiK00782.
OMAiQPLTWIS.
OrthoDBiPOG091H05ID.

Family and domain databases

Gene3Di3.40.50.10420. 1 hit.
InterProiIPR024185. FTHF_cligase-like.
IPR003741. LUD_dom.
[Graphical view]
PfamiPF02589. DUF162. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RT57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTIPSTAEA KLEMLTTINR AIAGSRPEAL PPYPVPAPLS RAEILHQFED
60 70 80 90 100
RILDYGAAYT HVSAAELPGA IAKALGNARR VIVPAGIPAP WLTVGMDVLR
110 120 130 140 150
DEPPLSHAEL DRADAVLTGC AVAISETGTI ILDHRADQGR RALSLIPDFH
160 170 180 190 200
ICVVREDQIV QTVREGVEAV AASVREGRPL TWLSGGSATS DIELVRVEGV
210
HGPRRLQVIV VG
Length:212
Mass (Da):22,621
Last modified:May 1, 2000 - v1
Checksum:i45F7C5B95FD1F7C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF11463.1.
PIRiA75338.
RefSeqiNP_295632.1. NC_001263.1.
WP_010888544.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF11463; AAF11463; DR_1909.
GeneIDi1797439.
KEGGidra:DR_1909.
PATRICi21631462. VBIDeiRad64572_2125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF11463.1.
PIRiA75338.
RefSeqiNP_295632.1. NC_001263.1.
WP_010888544.1. NC_001263.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2G40X-ray1.70A1-212[»]
ProteinModelPortaliQ9RT57.
SMRiQ9RT57. Positions 38-212.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_1909.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF11463; AAF11463; DR_1909.
GeneIDi1797439.
KEGGidra:DR_1909.
PATRICi21631462. VBIDeiRad64572_2125.

Phylogenomic databases

eggNOGiENOG41080R8. Bacteria.
COG1556. LUCA.
HOGENOMiHOG000257978.
InParanoidiQ9RT57.
KOiK00782.
OMAiQPLTWIS.
OrthoDBiPOG091H05ID.

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1942-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9RT57.

Family and domain databases

Gene3Di3.40.50.10420. 1 hit.
InterProiIPR024185. FTHF_cligase-like.
IPR003741. LUD_dom.
[Graphical view]
PfamiPF02589. DUF162. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiLUTC_DEIRA
AccessioniPrimary (citable) accession number: Q9RT57
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 11, 2014
Last sequence update: May 1, 2000
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.