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Protein

Lactate utilization protein C

Gene

lutC

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May function in L-lactate utilization.

Names & Taxonomyi

Protein namesi
Recommended name:
Lactate utilization protein C
Gene namesi
Name:lutC
Ordered Locus Names:DR_1909
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004293611 – 212Lactate utilization protein CAdd BLAST212

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi243230.DR_1909.

Structurei

Secondary structure

1212
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi41 – 54Combined sources14
Beta strandi58 – 62Combined sources5
Turni64 – 66Combined sources3
Helixi67 – 75Combined sources9
Beta strandi80 – 82Combined sources3
Helixi89 – 91Combined sources3
Beta strandi97 – 99Combined sources3
Helixi107 – 112Combined sources6
Beta strandi114 – 118Combined sources5
Beta strandi121 – 124Combined sources4
Turni125 – 128Combined sources4
Beta strandi129 – 132Combined sources4
Turni136 – 138Combined sources3
Helixi141 – 144Combined sources4
Beta strandi146 – 155Combined sources10
Helixi156 – 158Combined sources3
Beta strandi159 – 162Combined sources4
Helixi163 – 175Combined sources13
Beta strandi181 – 184Combined sources4
Beta strandi204 – 211Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2G40X-ray1.70A1-212[»]
ProteinModelPortaliQ9RT57.
SMRiQ9RT57.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RT57.

Family & Domainsi

Sequence similaritiesi

Belongs to the LutC/YkgG family.Curated

Phylogenomic databases

eggNOGiENOG41080R8. Bacteria.
COG1556. LUCA.
HOGENOMiHOG000257978.
InParanoidiQ9RT57.
KOiK00782.
OMAiQPLTWIS.
OrthoDBiPOG091H05ID.

Family and domain databases

Gene3Di3.40.50.10420. 1 hit.
InterProiIPR024185. FTHF_cligase-like.
IPR003741. LUD_dom.
[Graphical view]
PfamiPF02589. LUD_dom. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RT57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTIPSTAEA KLEMLTTINR AIAGSRPEAL PPYPVPAPLS RAEILHQFED
60 70 80 90 100
RILDYGAAYT HVSAAELPGA IAKALGNARR VIVPAGIPAP WLTVGMDVLR
110 120 130 140 150
DEPPLSHAEL DRADAVLTGC AVAISETGTI ILDHRADQGR RALSLIPDFH
160 170 180 190 200
ICVVREDQIV QTVREGVEAV AASVREGRPL TWLSGGSATS DIELVRVEGV
210
HGPRRLQVIV VG
Length:212
Mass (Da):22,621
Last modified:May 1, 2000 - v1
Checksum:i45F7C5B95FD1F7C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF11463.1.
PIRiA75338.
RefSeqiNP_295632.1. NC_001263.1.
WP_010888544.1. NZ_CP015081.1.

Genome annotation databases

EnsemblBacteriaiAAF11463; AAF11463; DR_1909.
GeneIDi1797439.
KEGGidra:DR_1909.
PATRICi21631462. VBIDeiRad64572_2125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000513 Genomic DNA. Translation: AAF11463.1.
PIRiA75338.
RefSeqiNP_295632.1. NC_001263.1.
WP_010888544.1. NZ_CP015081.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2G40X-ray1.70A1-212[»]
ProteinModelPortaliQ9RT57.
SMRiQ9RT57.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_1909.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF11463; AAF11463; DR_1909.
GeneIDi1797439.
KEGGidra:DR_1909.
PATRICi21631462. VBIDeiRad64572_2125.

Phylogenomic databases

eggNOGiENOG41080R8. Bacteria.
COG1556. LUCA.
HOGENOMiHOG000257978.
InParanoidiQ9RT57.
KOiK00782.
OMAiQPLTWIS.
OrthoDBiPOG091H05ID.

Miscellaneous databases

EvolutionaryTraceiQ9RT57.

Family and domain databases

Gene3Di3.40.50.10420. 1 hit.
InterProiIPR024185. FTHF_cligase-like.
IPR003741. LUD_dom.
[Graphical view]
PfamiPF02589. LUD_dom. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiLUTC_DEIRA
AccessioniPrimary (citable) accession number: Q9RT57
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 11, 2014
Last sequence update: May 1, 2000
Last modified: November 2, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.