Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9RQI5

- GLGB_BERDE

UniProt

Q9RQI5 - GLGB_BERDE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Bergeriella denitrificans (Neisseria denitrificans)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei417 – 4171NucleophileUniRule annotation
Active sitei470 – 4701Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BRENDAi2.4.1.18. 3588.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
OrganismiBergeriella denitrificans (Neisseria denitrificans)
Taxonomic identifieri494 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeBergeriella

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7627621,4-alpha-glucan branching enzyme GlgBPRO_0000188719Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ9RQI5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9RQI5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRNRHIRRG YHPEAGERQI IDSLFAATHS DPFAYLGRHR VNDEREAVRV
60 70 80 90 100
LRPDAHHIDI IDRHTGAVIM PSEKIDERGL FAAVLPEHAP DYALLVTYHE
110 120 130 140 150
GEAAVREEDD YRFGSALQHT DAWLLGEGTH LRPYETLGAH FAEMDGVSGV
160 170 180 190 200
RFAVWAPNAR RVSVIGEFNG WDSRRHAMRP HTGNGLWDIF IPGVGLNALY
210 220 230 240 250
KFSVLDANGN IREKADPYAF GAELRPTTAS VVRGLPAKAE APAFRRRANS
260 270 280 290 300
VEAPISIYEV HLGSWRRNPE NNYWLTYTQL ADELVNYVKD MGFTHIELLP
310 320 330 340 350
LSEYPFDGSW GYQATGLYAP TSRFGSPDEL KALIDAAHAA GISVILDWVA
360 370 380 390 400
GHFPTDDHGL NTFDGTALYE HADPREGYHQ DWNTLIYNFG RNEVKNFLQG
410 420 430 440 450
NALYWIERFG FDGIRVDAVA SMIYRNYSRK DGEWIPNRYG GSENLEAIAF
460 470 480 490 500
LRQTNAVLKS ETPGAGSFAE ESTSFADVTR EAGLNFDFKW NMGWMNDTLR
510 520 530 540 550
YMQEDPVHRK YHHGKMTFGM MYQYSENFVL PLSHDEVVHG KRSLLGKMPG
560 570 580 590 600
DCWQQFANLR AYYGFMYGFP GKKLLFMGNE FAQGREWNYQ EGLDWHLLDE
610 620 630 640 650
AGGWHKGVQD YVRDLNHIYT AHAPLYQLDQ QPEGFEWLVA DDSDNSVFVF
660 670 680 690 700
ERRDRAGNRI IVISNFTPVV REHYRFGVNA PGRYTEILNS DRTQYQGSGI
710 720 730 740 750
ANGADITAEN VPSHGKAQSL SLTLPPLATV YLYQKAAPAT EIQTALRADK
760
QPAVKDKQAK AK
Length:762
Mass (Da):86,367
Last modified:May 1, 2000 - v1
Checksum:i9922F80406DDE3E3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF102867 Genomic DNA. Translation: AAF04747.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF102867 Genomic DNA. Translation: AAF04747.1 .

3D structure databases

ProteinModelPortali Q9RQI5.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Enzyme and pathway databases

UniPathwayi UPA00164 .
BRENDAi 2.4.1.18. 3588.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular cloning, functional expression and purification of a glucan branching enzyme from Neisseria denitrificans."
    Buettcher V., Quanz M., Willmitzer L.
    Biochim. Biophys. Acta 1432:406-412(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 14686 / DSM 17675 / CIP 72.16 / JCM 21446 / NBRC 102155 / NCTC 10295.

Entry informationi

Entry nameiGLGB_BERDE
AccessioniPrimary (citable) accession number: Q9RQI5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: May 1, 2000
Last modified: October 1, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3