Unreviewed,
UniProtKB/TrEMBL Q9RQB8 (Q9RQB8_9MICO)
Last modified
May 5, 2009.
Version 38.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Recommended name: Endo-1,4-beta-xylanase RuleBase RU004392V0 EC=3.2.1.8 | ||
| Gene names |
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| Organism | Xylanimicrobium pachnodae EMBL AAD54767.1 | ||
| Taxonomic identifier | 101489 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Promicromonosporaceae › Xylanimicrobium |
Protein attributes
| Sequence length | 335 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392V0 |
| Pathway | |
| Sequence similarities | Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Xylan degradation RuleBase RU003433V0 |
| Molecular function | Glycosidase RuleBase RU003433V0 Hydrolase |
| Gene Ontology (GO) | |
| Biological process | xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC polysaccharide bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Molecular and biochemical characterization of two xylanase-encoding genes from Cellulomonas pachnodae." Cazemier A.E., Verdoes J.C., van Ooyen A.J., Op den Camp H.J. Appl. Environ. Microbiol. 65:4099-4107(1999) [PubMed: 10473422] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AF120156 Genomic DNA. Translation: AAD54767.1. | |
3D structure databases | |
| HSSP | HSSP built from PDB template 1M4W based on UniProtKB Q8GMV7. |
| SMR | Q9RQB8. Positions 45-220. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | CBM2. Carbohydrate-Binding Module Family 2. GH11. Glycoside Hydrolase Family 11. |
Family and domain databases | |
| InterPro | IPR001919. CBD_bac. IPR012291. CBD_carb_bd. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. [Graphical view] |
| Gene3D | G3DSA:2.60.40.290. CBD_carb_bd. 1 hit. G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit. |
| Pfam | PF00553. CBM_2. 1 hit. PF00457. Glyco_hydro_11. 1 hit. [Graphical view] |
| PRINTS | PR00911. GLHYDRLASE11. |
| SMART | SM00637. CBD_II. 1 hit. [Graphical view] |
| PROSITE | PS51173. CBM2. 1 hit. PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9RQB8_9MICO | ||||||||
| Accession | Primary (citable) accession number: Q9RQB8 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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