Unreviewed, UniProtKB/TrEMBL Q9RQB7 (Q9RQB7_9MICO)

Names and origin

Protein names

Submitted name:
    Endo-1,4-beta-xylanase EMBL AAD54768.1
    EC=3.2.1.8

Gene names

Name:

xyn10B EMBL AAD54768.1

Organism

Xylanimicrobium pachnodae EMBL AAD54768.1

Taxonomic identifier

101489 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Promicromonosporaceae › Xylanimicrobium

Protein attributes

Sequence length	1183 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9RQB7-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: BBE687F63A543F02	FASTA	1,183	124,137
	10 20 30 40 50 60 MHSRQSLSPG RVPGGPAPEH VGRTSRGWRR VIASGATAAL IAGGALVGGA LTSSAAAEPT 70 80 90 100 110 120 VVSAVDFEDG TTGTWTQSGS PTLAVVESPD GADDGQVLSI TRAADYEGIQ SPTGIFTPGQ 130 140 150 160 170 180 TYDFTMRARL AADVAGTADV RFVGKPGYSW IGNTTISAAG WTTVSGSWTA PADATTDTLQ 190 200 210 220 230 240 AYIGSADLTA AYTLLVDDIV VTTTETSTGE GPAAGTVIAD TDFDDQTLQG WVPRQPDDTA 250 260 270 280 290 300 PTLAVVAGGA DGTGYAAQVS DRDSDGDGLQ YDVAAAGVSG ATLQYEAWVR FADGEPAGEM 310 320 330 340 350 360 TLSARTVNAG ATAYSNLSSI SGATNDGWTK VGGTFTMPAG TFTMPAYDTA AELYFETKYN 370 380 390 400 410 420 SGNVSTFQVD QVRVWVPEPA VVDTSLTPLK DTVDIPGMGV AIDSRETTGS PSDLLLHHFN 430 440 450 460 470 480 QITAENSMKV EAWYDADRNF RINPDAVSLL DFAAANDVRV YGHVLLWHSQ TPDWFFHARG 490 500 510 520 530 540 TALTSSEEDK QFLRDRLKTH IDNVAKAISD HSGLFGSDTN PMVAFDVVNE VVSDGNEPGD 550 560 570 580 590 600 GLRRSAWYSV LGEEFIPLAF EYADEAFNQT YAAEGSDRPV KLFINDYNTE QSAKQDRYYA 610 620 630 640 650 660 LVERLLAAGV PVDGVGHQFH ASLATPTSSL DAALTRFAAL PVVQAVTELD NTVGTPVTEA 670 680 690 700 710 720 NLIKQGHWYQ DAFNVFRSHA DDLFSVTVWG LTDARSWRSE QAPVLFDGDL QAKQAYFGAA 730 740 750 760 770 780 GLDVEPLLTA ANVFGGSMDL SAGAAAVADD VAWRNLPAQQ LTGGAGSFVP RWSAGTLTLL 790 800 810 820 830 840 VTVASDTSDA VGVTLGDAEV SIAKDGAVTG DAQGVVIDDD GAGWRAAIQL PLAADVTAGS 850 860 870 880 890 900 SAQLDVRVLA DGTAVGGWNS PGATGTLTFL EDLSTVDVVE AAQAPEIDGQ VDDAWADAEV 910 920 930 940 950 960 VSTGKTVEGG ADGATAQVRT LWSGDDTLYV LAEVTDPVVD VSSADPWNQD SVELFLDLGN 970 980 990 1000 1010 1020 TKPAAYGPNV SQMRISADNV TSFGTGDAAA QAARLTSATA RTDTGYVVEL AVTLRGQSGG 1030 1040 1050 1060 1070 1080 QDDVALGGAD TFQGLDVQVN DGRDGARYAV HTWADPTGTG YQTGARWGVA HLVAPAAPQY 1090 1100 1110 1120 1130 1140 DAWVATQVYV AGDRVEVDGR VFEAQWWTQG QHPLVSGPWG SWMEVGAVVT VVDGEPVLAW 1150 1160 1170 1180 TSSWVYPGGD VVAYDGSLWK AKWWTRNQAP GDVYGPWQKV GTV

References

[1]	"Molecular and biochemical characterization of two xylanase-encoding genes from Cellulomonas pachnodae." Cazemier A.E., Verdoes J.C., van Ooyen A.J., Op den Camp H.J. Appl. Environ. Microbiol. 65:4099-4107(1999) [PubMed: 10473422] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF120157 Genomic DNA. Translation: AAD54768.1.
3D structure databases
HSSP	HSSP built from PDB template 1E0W based on UniProtKB P26514.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. CBM5. Carbohydrate-Binding Module Family 5. CBM9. Carbohydrate-Binding Module Family 9. GH10. Glycoside Hydrolase Family 10.
Family and domain databases
InterPro	IPR010502. Carb-bd_9. IPR015922. Carb-bd_9-like. IPR003610. CBM_5_12. IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR018087. Glyco_hydro_5_CS. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 2 hits. PF02839. CBM_5_12. 2 hits. PF06452. DUF1083. 1 hit. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00495. ChtBD3. 2 hits. SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00659. GLYCOSYL_HYDROL_F5. 1 hit. Uncertain. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9RQB7_9MICO

Accession

Primary (citable) accession number: Q9RQB7

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)