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Q9RPY4 (VIRB1_BRUSU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Type IV secretion system protein virB1
Gene names
Name:virB1
Ordered Locus Names:BRA0069, BS1330_II0069
OrganismBrucella suis biovar 1 (strain 1330) [Complete proteome] [HAMAP]
Taxonomic identifier204722 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length238 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

The VirB system could be required for the establishment of the replication niche in the host. Ref.1

Induction

Specifically induced within macrophages by phagosome acidification. Induced at 37 degrees Celsius in minimal medium, suggesting that nutritional stress is a regulating signal.

Miscellaneous

Transcription of the operon is maximal in early exponential phase.

Sequence similarities

Belongs to the virb1 family.

Ontologies

Keywords
   Biological processVirulence
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 238238Type IV secretion system protein virB1
PRO_0000289554

Sequences

Sequence LengthMass (Da)Tools
Q9RPY4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: A8CDE5C128DC61DD

FASTA23825,200
        10         20         30         40         50         60 
MVPFLVLAQQ CAPTVAPQTM AAIVQVESGF NPYAIGVVGG RLVRQPVSLD EAITTAQSLE 

        70         80         90        100        110        120 
AKGWNFSLGI AQVNRYNLPK YGSTYAQAFD PCKNLKMGSK ILEDCYRRAI VKMPGQEQGA 

       130        140        150        160        170        180 
LRAAFSCYYA GNFTGGFKTK PGSPSYVQKV VASADVTTKP IAVVPMIRKT PDAAAAVAAP 

       190        200        210        220        230 
VKKRQPADRN SVLVDLHPSS QSMPATGAAN APVRLKTEQP ATTDAPPGKD NTDGVVVF 

« Hide

References

« Hide 'large scale' references
[1]"A homologue of the Agrobacterium tumefaciens VirB and Bordetella pertussis Ptl type IV secretion systems is essential for intracellular survival of Brucella suis."
O'Callaghan D., Cazevieille C., Allardet-Servent A., Boschiroli M.L., Bourg G., Foulongne V., Frutos P., Kulakov Y., Ramuz M.
Mol. Microbiol. 33:1210-1220(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION.
Strain: 1330.
[2]"The Brucella suis virB operon is induced intracellularly in macrophages."
Boschiroli M.L., Ouahrani-Bettache S., Foulongne V., Michaux-Charachon S., Bourg G., Allardet-Servent A., Cazevieille C., Liautard J.P., Ramuz M., O'Callaghan D.
Proc. Natl. Acad. Sci. U.S.A. 99:1544-1549(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], EXPRESSION CONDITIONS.
Strain: 1330.
[3]"The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts."
Paulsen I.T., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F., Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., Daugherty S.C., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Nelson W.C., Ayodeji B., Kraul M. expand/collapse author list , Shetty J., Malek J.A., Van Aken S.E., Riedmuller S., Tettelin H., Gill S.R., White O., Salzberg S.L., Hoover D.L., Lindler L.E., Halling S.M., Boyle S.M., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 99:13148-13153(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1330.
[4]"Revised genome sequence of Brucella suis 1330."
Tae H., Shallom S., Settlage R., Preston D., Adams L.G., Garner H.R.
J. Bacteriol. 193:6410-6410(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1330.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF141604 Genomic DNA. Translation: AAD56611.1.
AE014292 Genomic DNA. Translation: AAN33281.1.
CP002998 Genomic DNA. Translation: AEM19561.1.
RefSeqNP_699276.1. NC_004311.2.
YP_005613787.1. NC_017250.1.

3D structure databases

ProteinModelPortalQ9RPY4.
ModBaseSearch...

Protein-protein interaction databases

STRING204722.BRA0069.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN33281; AAN33281; BRA0069.
AEM19561; AEM19561; BS1330_II0069.
GeneID1164506.
12139503.
KEGGbms:BRA0069.
bsi:BS1330_II0069.
PATRIC17792939. VBIBruSui107850_2288.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG06545.
HOGENOMHOG000119040.
KOK03194.
OMAEDAFEPC.
ProtClustDBCLSK884272.

Family and domain databases

InterProIPR023346. Lysozyme-like_dom.
IPR008258. Lytic_TGlycosylase-like_cat.
[Graphical view]
PfamPF01464. SLT. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameVIRB1_BRUSU
AccessionPrimary (citable) accession number: Q9RPY4
Secondary accession number(s): G0KER7, Q7CEF9
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Brucella suis

Brucella suis (strain 1330): entries and gene names

SIMILARITY comments

Index of protein domains and families