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Protein
Submitted name:

Putative glycosyl transferase

Gene

snogD

Organism
Streptomyces nogalater
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • identical protein binding Source: IntAct
  • transferase activity, transferring hexosyl groups Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Protein family/group databases

CAZyiGT1. Glycosyltransferase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative glycosyl transferaseImported
Gene namesi
Name:snogDImported
OrganismiStreptomyces nogalaterImported
Taxonomic identifieri38314 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself2EBI-7975592,EBI-7975592

GO - Molecular functioni

  • identical protein binding Source: IntAct

Protein-protein interaction databases

MINTiMINT-8386012.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AMBX-ray2.62A/B13-390[»]
4AMGX-ray2.59A/B13-390[»]
4AN4X-ray2.70A/B/C/D13-390[»]
ProteinModelPortaliQ9RN61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini200 – 28182DUF1205InterPro annotationAdd
BLAST

Family and domain databases

InterProiIPR010610. DUF1205.
IPR002213. UDP_glucos_trans.
[Graphical view]
PANTHERiPTHR11926. PTHR11926. 1 hit.
PfamiPF06722. DUF1205. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RN61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVPGSCRTG GIMRALFITS PGLSHILPTV PLAQALRALG HEVRYATGGD
60 70 80 90 100
IRAVAEAGLC AVDVSPGVNY AKLFVPDDTD VTDPMHSEGL GEGFFAEMFA
110 120 130 140 150
RVSAVAVDGA LRTARSWRPD LVVHTPTQGA GPLTAAALQL PCVELPLGPA
160 170 180 190 200
DSEPGLGALI RRAMSKDYER HGVTGEPTGS VRLTTTPPSV EALLPEDRRS
210 220 230 240 250
PGAWPMRYVP YNGGAVLPDW LPPAAGRRRI AVTLGSIDAL SGGIAKLAPL
260 270 280 290 300
FSEVADVDAE FVLTLGGGDL ALLGELPANV RVVEWIPLGA LLETCDAIIH
310 320 330 340 350
HGGSGTLLTA LAAGVPQCVI PHGSYQDTNR DVLTGLGIGF DAEAGSLGAE
360 370 380 390
QCRRLLDDAG LREAALRVRQ EMSEMPPPAE TAAKLVALAG
Length:390
Mass (Da):40,566
Last modified:May 1, 2000 - v1
Checksum:iDFE254AFDF683D61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187532 Genomic DNA. Translation: AAF01811.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187532 Genomic DNA. Translation: AAF01811.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AMBX-ray2.62A/B13-390[»]
4AMGX-ray2.59A/B13-390[»]
4AN4X-ray2.70A/B/C/D13-390[»]
ProteinModelPortaliQ9RN61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-8386012.

Protein family/group databases

CAZyiGT1. Glycosyltransferase Family 1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR010610. DUF1205.
IPR002213. UDP_glucos_trans.
[Graphical view]
PANTHERiPTHR11926. PTHR11926. 1 hit.
PfamiPF06722. DUF1205. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Characterization of Streptomyces nogalater genes encoding enzymes involved in glycosylation steps in nogalamycin biosynthesis."
    Torkkell S., Ylihonko K., Hakala J., Skurnik M., Mantsala P.
    Mol. Gen. Genet. 256:203-209(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC27451Imported.
  2. "Identification of a cyclase gene dictating the C-9 stereochemistry of anthracyclines from Streptomyces nogalater."
    Torkkell S., Kunnari T., Palmu K., Hakala J., Mantsala P., Ylihonko K.
    Antimicrob. Agents Chemother. 44:396-399(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC27451Imported.
  3. "Crystal structure of the glycosyltransferase SnogD from the biosynthetic pathway of nogalamycin in Streptomyces nogalater."
    Claesson M., Siitonen V., Dobritzsch D., Metsa-Ketela M., Schneider G.
    FEBS J. 279:3251-3263(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.59 ANGSTROMS) OF 13-390.

Entry informationi

Entry nameiQ9RN61_STRNO
AccessioniPrimary (citable) accession number: Q9RN61
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: December 9, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.