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Q9RMP7

- 6PGL_XENNA

UniProt

Q9RMP7 - 6PGL_XENNA

Protein

6-phosphogluconolactonase

Gene

pgl

Organism
Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 2 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.UniRule annotation

    Catalytic activityi

    6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. 6-phosphogluconolactonase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pentose-phosphate shunt Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Glucose metabolism

    Enzyme and pathway databases

    BioCyciXNEM406817:GHY4-1443-MONOMER.
    UniPathwayiUPA00115; UER00409.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    6-phosphogluconolactonaseUniRule annotation (EC:3.1.1.31UniRule annotation)
    Short name:
    6-P-gluconolactonaseUniRule annotation
    Gene namesi
    Name:pglUniRule annotation
    Ordered Locus Names:XNC1_1437
    OrganismiXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)
    Taxonomic identifieri406817 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus
    ProteomesiUP000008075: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 3283286-phosphogluconolactonasePRO_0000171141Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ9RMP7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the cycloisomerase 2 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000257418.
    KOiK07404.

    Family and domain databases

    Gene3Di2.130.10.10. 1 hit.
    HAMAPiMF_01605. 6P_gluconolactonase.
    InterProiIPR022528. 6-phosphogluconolactonase_YbhE.
    IPR019405. Lactonase_7-beta_prop.
    IPR011045. N2O_reductase_N.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view]
    PfamiPF10282. Lactonase. 1 hit.
    [Graphical view]
    SUPFAMiSSF50974. SSF50974. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9RMP7-1 [UniParc]FASTAAdd to Basket

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    MKQVVYTASP NSRQIHVWSL NVEGGLSLLQ TVDVPGEVQP MVINPDGKHL    50
    YVGIRPQFSI VTYAIGKNGS LEQKSIAPLP GSPTHISTDR AGRFLFSASY 100
    SFNNLSVHPI DDQGNVKAPI QIVENLQAPH SANIDRENRQ LLVPCLKEDH 150
    IRIFNMDNQG YLVESHADAI TTETGAGPRH MAFHPKKQAI YCINELDSTV 200
    DVLRKWEKYR IVQSVDSLPA DFSSVRWSAD IHMTPDGRHL YTSERSESLI 250
    SHFRVSEEGY HLTLAGHYLT ETQPRGFAID HSGHFLIASG QKSDHISVSR 300
    IDKFSGELTQ LARYPVGKSP MWVTILAL 328
    Length:328
    Mass (Da):36,600
    Last modified:June 15, 2010 - v2
    Checksum:i9F52F5F67DFADF92
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti227 – 2271W → C in AAF04393. (PubMed:10742251)Curated
    Sequence conflicti258 – 2581E → G in AAF04393. (PubMed:10742251)Curated
    Sequence conflicti265 – 2651A → T in AAF04393. (PubMed:10742251)Curated
    Sequence conflicti273 – 2808QPRGFAID → NPVALPLI in AAF04393. (PubMed:10742251)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN667742 Genomic DNA. Translation: CBJ89500.1.
    AF191556 Genomic DNA. Translation: AAF04393.1.
    RefSeqiYP_003711700.1. NC_014228.1.

    Genome annotation databases

    EnsemblBacteriaiCBJ89500; CBJ89500; XNC1_1437.
    GeneIDi9430193.
    KEGGixne:XNC1_1437.
    PATRICi42462698. VBIXenNem38452_1323.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN667742 Genomic DNA. Translation: CBJ89500.1 .
    AF191556 Genomic DNA. Translation: AAF04393.1 .
    RefSeqi YP_003711700.1. NC_014228.1.

    3D structure databases

    ProteinModelPortali Q9RMP7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBJ89500 ; CBJ89500 ; XNC1_1437 .
    GeneIDi 9430193.
    KEGGi xne:XNC1_1437.
    PATRICi 42462698. VBIXenNem38452_1323.

    Phylogenomic databases

    HOGENOMi HOG000257418.
    KOi K07404.

    Enzyme and pathway databases

    UniPathwayi UPA00115 ; UER00409 .
    BioCyci XNEM406817:GHY4-1443-MONOMER.

    Family and domain databases

    Gene3Di 2.130.10.10. 1 hit.
    HAMAPi MF_01605. 6P_gluconolactonase.
    InterProi IPR022528. 6-phosphogluconolactonase_YbhE.
    IPR019405. Lactonase_7-beta_prop.
    IPR011045. N2O_reductase_N.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view ]
    Pfami PF10282. Lactonase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50974. SSF50974. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
      Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.
    2. "Inactivation of a novel gene produces a phenotypic variant cell and affects the symbiotic behavior of Xenorhabdus nematophilus."
      Volgyi A., Fodor A., Forst S.
      Appl. Environ. Microbiol. 66:1622-1628(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 54-328.
      Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.

    Entry informationi

    Entry namei6PGL_XENNA
    AccessioniPrimary (citable) accession number: Q9RMP7
    Secondary accession number(s): D3VAR4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 1, 2005
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 58 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3