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Protein

Putative type-2 restriction enzyme NmeDIP

Gene

nmeDIRP

Organism
Neisseria meningitidis serogroup C
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Enzyme and pathway databases

BRENDAi3.1.21.4. 3593.

Protein family/group databases

REBASEi4187. NmeDI.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative type-2 restriction enzyme NmeDIP (EC:3.1.21.4)
Short name:
R.NmeDIP
Alternative name(s):
Endonuclease NmeDIP
Type II restriction enzyme NmeDIP
Gene namesi
Name:nmeDIRP
OrganismiNeisseria meningitidis serogroup C
Taxonomic identifieri135720 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 351351Putative type-2 restriction enzyme NmeDIPPRO_0000077351Add
BLAST

Sequencei

Sequence statusi: Complete.

Q9RLM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGQKLTAAN LVSAIDSLKK NVNYNYVNSS NTHTIQIVHV EKPEGPIKIK
60 70 80 90 100
RGDTETSISK QAIWRLADAL STGEPVNVDR VFGASYNFRS ALEALLAHTP
110 120 130 140 150
EIYWCKLQRI QPGLNKSEVV EGHKHIIWLP DRPHEKGVMK EYETDVVISE
160 170 180 190 200
IPSNNVVYDA LSLPSTHSEI DIDVKRRHVQ IQIALSAIGF QLGFRTWIAR
210 220 230 240 250
NDQGISYGDK KIADLDGIVQ KIESEKLISS FDGAVQAAMN IDCIWFRNGK
260 270 280 290 300
LMPAVMEVEH STGVRSGLAR MKQLKDLLPP YANTRWVIVA PDEDRDKVFK
310 320 330 340 350
EANVPMFKNL DTQYFPYSAV EELYSLCIRR KLTNKAVNEE FLDCFMEKCV

M
Length:351
Mass (Da):39,712
Last modified:May 1, 2000 - v1
Checksum:iE65509848A6FEB07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ238948 Genomic DNA. Translation: CAB59898.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ238948 Genomic DNA. Translation: CAB59898.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi4187. NmeDI.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.1.21.4. 3593.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Differential distribution of novel restriction-modification systems in clonal lineages of Neisseria meningitidis."
    Claus H., Friedrich A., Frosch M., Vogel U.
    J. Bacteriol. 182:1296-1303(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 2120 / Serogroup C / Serotype NT.

Entry informationi

Entry nameiT2D1_NEIMC
AccessioniPrimary (citable) accession number: Q9RLM3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: April 1, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.