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Q9RLM3 (T2D1_NEIMC) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative type-2 restriction enzyme NmeDIP

Short name=R.NmeDIP
EC=3.1.21.4
Alternative name(s):
Endonuclease NmeDIP
Type II restriction enzyme NmeDIP
Gene names
Name:nmeDIRP
OrganismNeisseria meningitidis serogroup C
Taxonomic identifier135720 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria

Protein attributes

Sequence length351 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

Ontologies

Keywords
   Biological processRestriction system
   Molecular functionEndonuclease
Hydrolase
Nuclease
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionType II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 351351Putative type-2 restriction enzyme NmeDIP
PRO_0000077351

Sequences

Sequence LengthMass (Da)Tools
Q9RLM3 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: E65509848A6FEB07

FASTA35139,712
        10         20         30         40         50         60 
MSGQKLTAAN LVSAIDSLKK NVNYNYVNSS NTHTIQIVHV EKPEGPIKIK RGDTETSISK 

        70         80         90        100        110        120 
QAIWRLADAL STGEPVNVDR VFGASYNFRS ALEALLAHTP EIYWCKLQRI QPGLNKSEVV 

       130        140        150        160        170        180 
EGHKHIIWLP DRPHEKGVMK EYETDVVISE IPSNNVVYDA LSLPSTHSEI DIDVKRRHVQ 

       190        200        210        220        230        240 
IQIALSAIGF QLGFRTWIAR NDQGISYGDK KIADLDGIVQ KIESEKLISS FDGAVQAAMN 

       250        260        270        280        290        300 
IDCIWFRNGK LMPAVMEVEH STGVRSGLAR MKQLKDLLPP YANTRWVIVA PDEDRDKVFK 

       310        320        330        340        350 
EANVPMFKNL DTQYFPYSAV EELYSLCIRR KLTNKAVNEE FLDCFMEKCV M 

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References

[1]"Differential distribution of novel restriction-modification systems in clonal lineages of Neisseria meningitidis."
Claus H., Friedrich A., Frosch M., Vogel U.
J. Bacteriol. 182:1296-1303(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 2120 / Serogroup C / Serotype NT.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ238948 Genomic DNA. Translation: CAB59898.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein family/group databases

REBASE4187. NmeDI.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameT2D1_NEIMC
AccessionPrimary (citable) accession number: Q9RLM3
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: April 16, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Restriction enzymes and methylases

Classification of restriction enzymes and methylases and list of entries