Q9RKN6 (Q9RKN6_STRCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Endo-1,4-beta-xylanase RuleBase RU004392
EC=3.2.1.8 RuleBase RU004392

Gene names

Ordered Locus Names:

SCO2292

Organism

Streptomyces coelicolor

Taxonomic identifier

1902 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392
Pathway	Glycan degradation; xylan degradation. RuleBase RU004392
Sequence similarities	Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433 EMBL CAB61738.1
Molecular function	Glycosidase RuleBase RU003433 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC polysaccharide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9RKN6 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: EC8D55E788CCF0C2	FASTA	335	35,533
	10 20 30 40 50 60 MNLLVQPRRR RRGPVTLLVR SAWAVALAAL AALMLPGTAQ ADTVVTTNQE GTNNGYYYSF 70 80 90 100 110 120 WTDSQGTVSM NMGSGGQYST SWRNTGNFVA GKGWANGGRR TVQYSGSFNP SGNAYLALYG 130 140 150 160 170 180 WTSNPLVEYY IVDNWGTYRP TGEYKGTVTS DGGTYDIYKT TRVNKPSVEG TRTFDQYWSV 190 200 210 220 230 240 RQAKRTGGTI TTGNHFDAWA RAGMPLGNFS YYMIMATEGY QSSGSSSINV GGTGGGDNGG 250 260 270 280 290 300 GDNGGGGGGC TATVSAGQKW GDRYNLDVSV SGASDWTVTM NVPSPAKVLS TWNVNASYPS 310 320 330 AQTLTARSNG SGNNWGATIQ ANGNWTWPSV SCSAG

References

[1]

"Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)." Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L., Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A., Fraser A., Goble A. , Hidalgo J., Hornsby T., Howarth S., Huang C.-H., Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S., Rabbinowitsch E., Rajandream M.A., Rutherford K.M., Rutter S., Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A., Woodward J.R., Barrell B.G., Parkhill J., Hopwood D.A. Nature 417:141-147(2002) [PubMed: 12000953] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-471 / A3(2) / M145.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL939112 Genomic DNA. Translation: CAB61738.1.
PIR	T50601.
RefSeq	NP_626540.1. NC_003888.3.
3D structure databases
HSSP	HSSP built from PDB template 1HIX based on UniProtKB Q59962.
ProteinModelPortal	Q9RKN6.
SMR	Q9RKN6. Positions 45-228.
ModBase	Search...
Protein family/group databases
CAZy	CBM2. Carbohydrate-Binding Module Family 2. GH11. Glycoside Hydrolase Family 11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1097725.
GenomeReviews	Gene locus SCO2292 in contig AL645882_GR.
KEGG	sco:SCO2292.
NMPDR	fig|100226.1.peg.2257.
PATRIC	23734240. VBIStrCoe124346_2329.
Phylogenomic databases
HOGENOM	HBG329722.
OMA	AWARHGM.
PhylomeDB	Q9RKN6.
ProtClustDB	CLSK2303412.
Family and domain databases
InterPro	IPR008965. Carb-bd_dom. IPR012291. CBD_carb-bd_dom. IPR001919. Cellulose-bd_dom_fam2_bac. IPR008985. ConA-like_lec_gl. IPR001137. Glyco_hydro_11. IPR013319. Glyco_hydro_11/12_cat. IPR018208. Glyco_hydro_11_AS. [Graphical view]
Gene3D	G3DSA:2.60.40.290. CBD_carb_bd. 1 hit. G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.
KO	K01181.
Pfam	PF00457. Glyco_hydro_11. 1 hit. [Graphical view]
PRINTS	PR00911. GLHYDRLASE11.
SMART	SM00637. CBD_II. 1 hit. [Graphical view]
SUPFAM	SSF49384. Cellul_bind. 1 hit. SSF49899. ConA_like_lec_gl. 1 hit.
PROSITE	PS51173. CBM2. 1 hit. PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit. PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9RKN6_STRCO

Accession

Primary (citable) accession number: Q9RKN6

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)