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Q9RKD4 (Q9RKD4_STRCO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
EC=2.1.1.198 HAMAP MF_01877
Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase HAMAP MF_01877
rRNA (cytidine-2'-O-)-methyltransferase RsmI HAMAP MF_01877
Gene names
Name:rsmI HAMAP MF_01877
Ordered Locus Names:SCO3153
OrganismStreptomyces coelicolor
Taxonomic identifier1902 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877

Catalytic activity

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877

Subcellular location

Cytoplasm By similarity HAMAP MF_01877.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmI family. HAMAP MF_01877

Ontologies

Keywords
   Biological processrRNA processing HAMAP MF_01877
   Cellular componentCytoplasm HAMAP MF_01877
   LigandS-adenosyl-L-methionine HAMAP MF_01877
   Molecular functionMethyltransferase HAMAP MF_01877
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processenzyme-directed rRNA 2'-O-methylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionrRNA (cytosine-2'-O-)-methyltransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9RKD4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 10C4F59DEEDB77DA

FASTA28630,302
        10         20         30         40         50         60 
MTGTLVLAGT PIGDVQDAPP RLAAELAGAD VVAAEDTRRL RRLTQALGVA PAGRVVSYFE 

        70         80         90        100        110        120 
GNESARTPEL VEELAGGARV LLVTDAGMPS VSDPGYRLVA AAVERGVRVT AVPGPSAVLT 

       130        140        150        160        170        180 
ALALSGLPVD RFCFEGFLPR KAGERLTRLR EVAGERRTLV YFEAPHRLDD TLAAMAEVFG 

       190        200        210        220        230        240 
TDRRAAVCRE LTKTYEEVRR GGLGELAAWA GEGVRGEITV VVEGAPDKGP EEVGAEELVR 

       250        260        270        280 
RVRVREEAGE RRKEAIAAVA AEVGVPKREV FDAVVAAKNA EKNTGI

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL939115 Genomic DNA. Translation: CAB59649.1.
RefSeqNP_627369.1. NC_003888.3.

3D structure databases

ProteinModelPortalQ9RKD4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1098587.
GenomeReviewsGene locus SCO3153 in contig AL645882_GR.
KEGGsco:SCO3153.
NMPDRfig|100226.1.peg.3114.
PATRIC23736048. VBIStrCoe124346_3214.

Phylogenomic databases

HOGENOMHBG529058.
OMAIASDRFC.
PhylomeDBQ9RKD4.
ProtClustDBCLSK569782.

Family and domain databases

HAMAPMF_01877. 16SrRNA_methyltr_I.
[Tree]
InterProIPR000878. 4pyrrol_Mease.
IPR014777. 4pyrrole_Mease_sub1.
IPR014776. 4pyrrole_Mease_sub2.
IPR008189. rRNA_ssu_MeTfrase_I.
[Graphical view]
Gene3DG3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
G3DSA:3.30.950.10. 4pyrrole_Mease_sub2. 1 hit.
KOK07056.
PANTHERPTHR21091:SF18. PTHR21091:SF18. 1 hit.
PfamPF00590. TP_methylase. 1 hit.
[Graphical view]
PIRSFPIRSF005917. MTase_YraL. 1 hit.
SUPFAMSSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMsTIGR00096. TIGR00096. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9RKD4_STRCO
AccessionPrimary (citable) accession number: Q9RKD4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info