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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO0332

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO0332Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO0332.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ZB9X-ray2.25A/B1-206[»]
ProteinModelPortaliQ9RK47.
SMRiQ9RK47. Positions 17-204.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RK47.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 8261HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH tetR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG41081H5. Bacteria.
COG1309. LUCA.
HOGENOMiHOG000266637.
InParanoidiQ9RK47.
OMAiWGAVYHR.
OrthoDBiEOG6VB6VF.
PhylomeDBiQ9RK47.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF16859. TetR_C_11. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RK47-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANDANGRPA PGSRGRGRRP AEEVRAEVLH AVGELLLTEG TAQLTFERVA
60 70 80 90 100
RVSGVSKTTL YKWWPSKGAL ALDGYFHAVE DTLAFPDTGD VRADLLAQLR
110 120 130 140 150
AFTHVMTRTP GGRILTELIG AAQTDADLAT AYRQLYSAQR RALAAERLRH
160 170 180 190 200
ARELGQIRPD VDVQVLVDQL WGAVYHRLLI PDEPVDDAFV TALVTNLLDG

VCPRPA
Length:206
Mass (Da):22,532
Last modified:May 1, 2000 - v1
Checksum:i65186B3A68D491A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939105 Genomic DNA. Translation: CAB56137.1.
RefSeqiNP_624656.1. NC_003888.3.
WP_011027025.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB56137; CAB56137; CAB56137.
GeneIDi1095755.
KEGGisco:SCO0332.
PATRICi23730168. VBIStrCoe124346_0306.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939105 Genomic DNA. Translation: CAB56137.1.
RefSeqiNP_624656.1. NC_003888.3.
WP_011027025.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2ZB9X-ray2.25A/B1-206[»]
ProteinModelPortaliQ9RK47.
SMRiQ9RK47. Positions 17-204.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO0332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB56137; CAB56137; CAB56137.
GeneIDi1095755.
KEGGisco:SCO0332.
PATRICi23730168. VBIStrCoe124346_0306.

Phylogenomic databases

eggNOGiENOG41081H5. Bacteria.
COG1309. LUCA.
HOGENOMiHOG000266637.
InParanoidiQ9RK47.
OMAiWGAVYHR.
OrthoDBiEOG6VB6VF.
PhylomeDBiQ9RK47.

Miscellaneous databases

EvolutionaryTraceiQ9RK47.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF16859. TetR_C_11. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.
  2. "Structural and functional analysis of the TetR-family transcriptional regulator SCO0332 from Streptomyces coelicolor."
    Okada U., Kondo K., Hayashi T., Watanabe N., Yao M., Tamura T., Tanaka I.
    Acta Crystallogr. D 64:198-205(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS).

Entry informationi

Entry nameiQ9RK47_STRCO
AccessioniPrimary (citable) accession number: Q9RK47
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 16, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.