Unreviewed, UniProtKB/TrEMBL Q9RIK9 (Q9RIK9_THEMA)

Names and origin

Protein names

Submitted name:
    Beta-mannosidase EMBL CAB56854.1

Gene names

Name:

manB EMBL CAB56854.1

Organism

Thermotoga maritima EMBL CAB56854.1

Taxonomic identifier

2336 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	680 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9RIK9-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 5BA3F6982194D1AA	FASTA	680	77,687
	10 20 30 40 50 60 MGIGGDDSWS PSVSAEFLLL IVELSFVLFA SDEFVKVENG KFALNGKEFR FIGSNNYYMH 70 80 90 100 110 120 YKSNGMIDSV LESARDMGIK VLRIWGFLDG ESYCRDKNTY MHPEPGVFGV PEGISNAQSG 130 140 150 160 170 180 FERLDYTVAK AKELGIKLVI VLVNNWDDFG GMNQYVRWFG GTHHDDFYRD EKIKEEYKKY 190 200 210 220 230 240 VSFLVNHVNT YTGVPYREEP TIMAWELANE PRCETDKSGN TLVEWVKEMS SYIKSLDPNH 250 260 270 280 290 300 LVAVGDEGFF SNYEGFKPYG GEAEWAYNGW SGVDWKKLLS IETVDFGTFH LYPSHWGVSP 310 320 330 340 350 360 ENYAQWGAKW IEDHIKIAKE IGKPVVLEEY GIPKSAPVNR TAIYRLWNDL VYDLGGDGAM 370 380 390 400 410 420 FWMLAGIGEG SDRDERGYYP DYDGFRIVND DSPEAELIRE YAKLFNTGED IREDTCSFIL 430 440 450 460 470 480 PKDGMEIKKT VEVRAGVFDY SNTFEKLSVK VEDLVFENEI EHLGYGIYGF DLDTTRIPDG 490 500 510 520 530 540 EHEMFLEGHF QGKTVKDSIK AKVVNEARYV LAEEVDFSSP EEVKNWWNSG TWQAEFGSPD 550 560 570 580 590 600 IEWNGEVGNG ALQLNVKLPG KSDWEEVRVA RKFERLSECE ILEYDIYIPN VEGLKGRLRP 610 620 630 640 650 660 YAVLNPGWVK IGLDMNNANV ESAEIITFGG KEYRRFHVRI EFDRTAGVKE LHIGVVGDHL 670 680 RYDGPIFIDN VRLYKRTGGM

References

[1]	"Amino Acid Sequence of beta-mannosidase genes from the hyperthermophilic bacteria Thermotoga maritima and Thermotoga neapolitana." Parker K.N., Lam D., Duffaud G., Snead M.A., Mathur E.J., Kelly R.M. Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MSB8 EMBL CAB56854.1.
[2]	"Structural and thermodynamic dissection of specific mannan recognition by a carbohydrate binding module, TmCBM27." Boraston A.B., Revett T.J., Boraston C.M., Nurizzo D., Davies G.J. Structure 11:665-675(2003) [PubMed: 12791255] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS) OF 505-680.

Cross-references

Sequence databases

EMBLGenBankDDBJ

Y17980 Genomic DNA. Translation: CAB56854.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1OF3	X-ray	2.00	A/B	505-680	[»]
1OF4	X-ray	1.60	A	505-680	[»]
1OH4	X-ray	1.35	A	505-680	[»]

ModBase

Search...

Protein family/group databases

CAZy

CBM27. Carbohydrate-Binding Module Family 27.
GH5. Glycoside Hydrolase Family 5.

Family and domain databases

InterPro

IPR015295. Carb_bd_module_27.
IPR004199. Glyco_hydro_42_D5.
IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

Pfam

PF02929. Bgal_small_N. 1 hit.
PF09212. CBM27. 1 hit.
PF00150. Cellulase. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9RIK9_THEMA

Accession

Primary (citable) accession number: Q9RIK9

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)