Reviewed,
UniProtKB/Swiss-Prot Q9RHG2 (ARAA_MYCSM)
Last modified
September 22, 2009.
Version 35.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: L-arabinose isomerase EC=5.3.1.4 | ||
| Gene names |
| ||
| Organism | Mycobacterium smegmatis | ||
| Taxonomic identifier | 1772 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium |
Protein attributes
| Sequence length | 501 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Catalyzes the conversion of L-arabinose to L-ribulose By similarity. |
| Catalytic activity | L-arabinose = L-ribulose. HAMAP MF_00519 |
| Cofactor | Binds 1 manganese ion per subunit By similarity. |
| Pathway | Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519 |
| Sequence similarities | Belongs to the arabinose isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Arabinose catabolism Carbohydrate metabolism |
| Ligand | Manganese Metal-binding |
| Molecular function | Isomerase |
| Gene Ontology (GO) | |
| Biological process | arabinose catabolic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | L-arabinose isomerase activity Inferred from electronic annotation. Source: HAMAP manganese ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 501 | 501 | L-arabinose isomerase HAMAP MF_00519 | PRO_0000198390 | |||||
Sites | |||||||||
| Metal binding | 306 | 1 | Manganese By similarity | ||||||
| Metal binding | 333 | 1 | Manganese By similarity | ||||||
| Metal binding | 350 | 1 | Manganese By similarity | ||||||
| Metal binding | 449 | 1 | Manganese By similarity | ||||||
Sequences
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References
| [1] | Soda A., Takata G., Izumori K. Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: SMDU. |
Cross-references
Sequence databases | |
|---|---|
| AB036736 Genomic DNA. Translation: BAA89428.1. AB038527 Genomic DNA. Translation: BAA92526.1. | |
3D structure databases | |
| ModBase | Search... |
Enzyme and pathway databases | |
| BRENDA | 5.3.1.4. 259. |
Family and domain databases | |
| HAMAP | MF_00519. [Tree] |
| InterPro | IPR003762. Lara_isomerase. [Graphical view] |
| Pfam | PF02610. Arabinose_Isome. 1 hit. [Graphical view] |
| PIRSF | PIRSF001478. L-ara_isomerase. 1 hit. |
| ProDom | PD018364. Lara_isomerase. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| ProtoNet | Search... |
Entry information
| Entry name | ARAA_MYCSM | ||||||||
| Accession | Primary (citable) accession number: Q9RHG2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


