Q9RGX8 (Q9RGX8_ZOBGA) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 46.
History...
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Beta-agarase B EMBL AAF21821.1 EC=3.2.1.81 EMBL AAF21821.1 | ||||
| Gene names |
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| Organism | Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) [Complete proteome] [HAMAP] EMBL AAF21821.1 | ||||
| Taxonomic identifier | 63186 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Zobellia |
Protein attributes
| Sequence length | 353 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL AAF21821.1 |
| Molecular function | Glycosidase EMBL AAF21821.1 Hydrolase |
| Technical term | 3D-structure PDB 1O4Z Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | beta-agarase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 18 | 18 | Potential EMBL AAF21821.1 | |||||
| Chain | 19 – 353 | 335 | beta-agarase B EMBL AAF21821.1 | PRO_5000055270 | ||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours." Jam M., Flament D., Allouch J., Potin P., Thion L., Kloareg B., Czjzek M., Helbert W., Michel G., Barbeyron T. Biochem. J. 385:703-713(2005) [PubMed: 15456406] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Dsij EMBL AAF21821.1. |
| [2] | "The three-dimensional structures of two beta-agarases." Allouch J., Jam M., Helbert W., Barbeyron T., Kloareg B., Henrissat B., Czjzek M. J. Biol. Chem. 278:47171-47180(2003) [PubMed: 12970344] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 19-353. |
| [3] | Genoscope - CEA Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DsiJT EMBL CAZ97711.1. |
| [4] | "Complete genome sequence of Zobellia galactanivorans Dsij." Genoscope - CEA Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF098955 Genomic DNA. Translation: AAF21821.1. FP476056 Genomic DNA. Translation: CAZ97711.1. | ||||||||||||
| RefSeq | YP_004737990.1. NC_015844.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q9RGX8. | ||||||||||||
| SMR | Q9RGX8. Positions 58-353. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein family/group databases | |||||||||||||
| CAZy | GH16. Glycoside Hydrolase Family 16. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 10976141. | ||||||||||||
Organism-specific databases | |||||||||||||
| CMR | Search... | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. | ||||||||||||
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | Q9RGX8_ZOBGA | ||||||||
| Accession | Primary (citable) accession number: Q9RGX8 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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