Unreviewed, UniProtKB/TrEMBL Q9RGX8 (Q9RGX8_9FLAO)

Names and origin

Protein names

Submitted name:
    Beta-agarase B EMBL AAF21821.1
    EC=3.2.1.81

Gene names

Name:

agaB EMBL AAF21821.1

Organism

Zobellia galactanivorans EMBL AAF21821.1

Taxonomic identifier

63186 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteria › Flavobacteriales › Flavobacteriaceae › Zobellia

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Domain	Signal
Molecular function	Glycosidase Hydrolase
Gene Ontology (GO)
Biological process	metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Potential EMBL AAF21821.1
	Chain	19 – 353	335	beta-agarase B EMBL AAF21821.1		PRO_5000055270

Sequences

	Sequence		Length	Mass (Da)
	Q9RGX8-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 2281286B0F30F9FC	FASTA	353	40,675
	10 20 30 40 50 60 MYLIYLRLVF CCALLLGCGD NSKFDSATDL PVEQEQEQET EQEGEPEESS EQDLVEEVDW 70 80 90 100 110 120 KDIPVPADAG PNMKWEFQEI SDNFEYEAPA DNKGSEFLEK WDDFYHNAWA GPGLTEWKRD 130 140 150 160 170 180 RSYVADGELK MWATRKPGSD KINMGCITSK TRVVYPVYIE ARAKVMNSTL ASDVWLLSAD 190 200 210 220 230 240 DTQEIDILEA YGADYSESAG KDHSYFSKKV HISHHVFIRD PFQDYQPKDA GSWFEDGTVW 250 260 270 280 290 300 NKEFHRFGVY WRDPWHLEYY IDGVLVRTVS GKDIIDPKHF TNTTDPGNTE IDTRTGLNKE 310 320 330 340 350 MDIIINTEDQ TWRSSPASGL QSNTYTPTDN ELSNIENNTF GVDWIRIYKP VEK

References

[1]

"The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours." Jam M., Flament D., Allouch J., Potin P., Thion L., Kloareg B., Czjzek M., Helbert W., Michel G., Barbeyron T. Biochem. J. 385:703-713(2005) [PubMed: 15456406] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Dsij EMBL AAF21821.1.

[2]

"The three-dimensional structures of two beta-agarases." Allouch J., Jam M., Helbert W., Barbeyron T., Kloareg B., Henrissat B., Czjzek M. J. Biol. Chem. 278:47171-47180(2003) [PubMed: 12970344] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF 19-353.

Cross-references

Sequence databases

EMBLGenBankDDBJ

AF098955 Genomic DNA. Translation: AAF21821.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1O4Z	X-ray	2.30	A/B/C/D	19-353	[»]

ModBase

Search...

Protein family/group databases

CAZy

GH16. Glycoside Hydrolase Family 16.

Family and domain databases

InterPro

IPR013320. ConA-like_subgrp.
[Graphical view]

Gene3D

G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q9RGX8_9FLAO

Accession

Primary (citable) accession number: Q9RGX8

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)