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Unreviewed, UniProtKB/TrEMBL Q9RGQ2 (Q9RGQ2_9VIBR)

Last modified September 2, 2008. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Alginate lyase AlyVGIII EMBL AAF22513.1
OrganismVibrio halioticoli EMBL AAF22513.1
Taxonomic identifier71388 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length235 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionLyase
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9RGQ2-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 95B0DF8E2F800FC9

FASTA23527,307
        10         20         30         40         50         60 
MIKKHQITLF IVATVVAVSA NAASVDYRQE YKHNDKSYAS RVKVGSSVGH HFFSLEAKQT 

        70         80         90        100        110        120 
GKPISDWQAA DNEFVYGYNF KVNKKWRITP SMPITFGNDR VTYKPQVRVQ YKFDSGLTSK 

       130        140        150        160        170        180 
LRYRHEFRNY TGDKSDKDSI DRSKITGNLD YKVGALQLGF EANYAEDFFH DNEWFGGKSA 

       190        200        210        220        230 
KRHNEWDYNV KIGYKETDWD WRPYIELGNV QYSNGPSVTN SNRQLRTRVG LTYSF 

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References

[1]"Cloning and expression of alginate lyase genes of Vibrio halioticoli."
Sugimura I., Sawabe T., Ezura Y.
Submitted (DEC-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IAM14596T EMBL AAF22513.1.

Cross-references

Sequence databases

AF114040 Genomic DNA. Translation: AAF22513.1.

3D structure databases

ModBaseSearch...

Family and domain databases

InterProIPR009331. Oligogalacturonate-sp_porin.
[Graphical view]
PfamPF06178. KdgM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9RGQ2_9VIBR
AccessionPrimary (citable) accession number: Q9RGQ2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 2, 2008
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information