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Unreviewed, UniProtKB/TrEMBL Q9RFN0 (Q9RFN0_CARML)

Last modified June 16, 2009. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Beta-galactosidase BgaB EMBL AAF16519.1
Gene names
Name: bgaB EMBL AAF16519.1
OrganismCarnobacterium maltaromaticum (Carnobacterium piscicola) EMBL AAF16519.1
Taxonomic identifier2751 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesCarnobacteriaceaeCarnobacterium

Protein attributes

Sequence length668 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q9RFN0-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6B256F81C06C4F17

FASTA66876,789
        10         20         30         40         50         60 
MLQQKKLFYG GDYNPEQWSK AIILEDMRLM KKANVNYVSL NIFGWASIQP TEEGFDFSFL 

        70         80         90        100        110        120 
DEMLDLLWEN GIGIDLANGT ASPPAWLVKK HPEILPVTSQ GTPLVHGSRQ HYCPSNKVYR 

       130        140        150        160        170        180 
SYVIRLTEEV AKRYATHPGI VMWHVNNEYT CHISECYCES CEKSFRQWLQ MKYKKINTLN 

       190        200        210        220        230        240 
ECWSTKFWSQ SYSQWDEIFL PKEMPTFKNP AHQLDYKRFI SDQNLTLFKA EKKAIRSYSK 

       250        260        270        280        290        300 
DIPVMTNLMG LHKHVDGFAF AEEMDVVGWD SYPNPFEEKP YPQFLANDLT RSLKKKPFLV 

       310        320        330        340        350        360 
MEQAPSAVNW RRANGAKSPG QMRLWSYEAL AHGADGILFF QWRQSQGGAE KFHSGMVSHN 

       370        380        390        400        410        420 
QDTNSRIFKE VVQLGTEMSQ LDELVGTNYN AEVAIVFDWE NWWALELDAK PSGEINYIKQ 

       430        440        450        460        470        480 
MRDLYTIFHE LNIGVDFIHP KEDLSNYKLV LSIAQYLVTD DFSAKVKRYI KAGGHFLTTF 

       490        500        510        520        530        540 
FSGIVDEYDR VYLGGYPGAF KEVLGIYVEE FDPMPIGRKS QIKYGETYYT TELWKEVIHL 

       550        560        570        580        590        600 
QGAETIATFT EGYLMGQPAL TKFGYGKGKT YYMGTKLAKD GNMKFIQTIL AESKIQPLNQ 

       610        620        630        640        650        660 
VEIESENSKI SMTCRSNSSH DYIFLLNYGQ TSEKVKLKKG GQSLLDGSMV EGEVSVKAND 


VKIIKLTK 

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References

[1]"Biochemical and phylogenetic analyses of a cold-active beta-galactosidase from the lactic acid bacterium Carnobacterium piscicola BA."
Coombs J.M., Brenchley J.E.
Appl. Environ. Microbiol. 65:5443-5450(1999) [PubMed: 10584002] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BA EMBL AAF16519.1.

Cross-references

Sequence databases

AF184246 Genomic DNA. Translation: AAF16519.1.

3D structure databases

HSSPHSSP built from PDB template 1KWG based on UniProtKB O69315.
ModBaseSearch...

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Family and domain databases

InterProIPR013739. Beta_Galactosidase_C.
IPR013738. Beta_Galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9RFN0_CARML
AccessionPrimary (citable) accession number: Q9RFN0
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information