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Protein
Submitted name:

Putative TetR-family regulator

Gene

SCO0857

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative TetR-family regulatorImported
Gene namesi
Ordered Locus Names:SCO0857Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ9RCV4.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO0857.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NP3X-ray2.35A/B1-212[»]
ProteinModelPortaliQ9RCV4.
SMRiQ9RCV4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RCV4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 89HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000021524.
InParanoidiQ9RCV4.
OMAiRRYLELW.
OrthoDBiPOG091H02BD.
PhylomeDBiQ9RCV4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RCV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGQAAGPAA GPAAGQATKH AGGRRPGETR TREAILTAAR VCFAERGFDA
60 70 80 90 100
TSLRRIAETA GVDQSLVHHF YGTKENLFLQ ALELPGKIEE AITAAAQGGL
110 120 130 140 150
DGIGERVVRA HLSVWDDVSS RPALMTMVRS AAIHRAAAAR LRETATGILA
160 170 180 190 200
RALGGVITGE DAMLRTSMVA TQLVGLAMMR YVAHLEPLAS ADTDTVARHY
210
GRAVQAIVTD RD
Length:212
Mass (Da):22,322
Last modified:May 1, 2000 - v1
Checksum:iA1ACEBCBAA4AAD80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939107 Genomic DNA. Translation: CAB65638.1.
RefSeqiNP_625157.1. NC_003888.3.
WP_011027396.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB65638; CAB65638; CAB65638.
GeneIDi1096280.
KEGGisco:SCO0857.
PATRICi23731254. VBIStrCoe124346_0849.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939107 Genomic DNA. Translation: CAB65638.1.
RefSeqiNP_625157.1. NC_003888.3.
WP_011027396.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NP3X-ray2.35A/B1-212[»]
ProteinModelPortaliQ9RCV4.
SMRiQ9RCV4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO0857.

Proteomic databases

PRIDEiQ9RCV4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB65638; CAB65638; CAB65638.
GeneIDi1096280.
KEGGisco:SCO0857.
PATRICi23731254. VBIStrCoe124346_0849.

Phylogenomic databases

HOGENOMiHOG000021524.
InParanoidiQ9RCV4.
OMAiRRYLELW.
OrthoDBiPOG091H02BD.
PhylomeDBiQ9RCV4.

Miscellaneous databases

EvolutionaryTraceiQ9RCV4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9RCV4_STRCO
AccessioniPrimary (citable) accession number: Q9RCV4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.