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Protein
Submitted name:

Iron-enterobactin transporter periplasmic binding protein

Gene

viuP

Organism
Vibrio cholerae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Protein family/group databases

TCDBi3.A.1.14.6. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Submitted name:
Iron-enterobactin transporter periplasmic binding proteinImported
Submitted name:
Periplasmic binding proteinImported
Gene namesi
Name:viuPImported
ORF Names:ERS013140_02227Imported, ERS013165_02595Imported, ERS013186_02145Imported, ERS013199_00569Imported, ERS013202_00573Imported, ERS013206_00558Imported, ERS013207_01480Imported, ERS013262_00479Imported
OrganismiVibrio choleraeImported
Taxonomic identifieri666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000043247 Componenti: Unassembled WGS sequence
  • UP000040416 Componenti: Unassembled WGS sequence
  • UP000045183 Componenti: Unassembled WGS sequence
  • UP000044626 Componenti: Unassembled WGS sequence
  • UP000045578 Componenti: Unassembled WGS sequence
  • UP000044503 Componenti: Unassembled WGS sequence
  • UP000044806 Componenti: Unassembled WGS sequence
  • UP000038065 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 325297Sequence analysisPRO_5007216028Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi345073.VC0395_A0305.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3R5SX-ray1.79A29-325[»]
3R5TX-ray1.45A29-325[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini53 – 318266Fe/B12 periplasmic-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains Fe/B12 periplasmic-binding domain.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105PEC. Bacteria.
COG4592. LUCA.

Family and domain databases

InterProiIPR002491. ABC_transptr_periplasmic_BD.
[Graphical view]
PfamiPF01497. Peripla_BP_2. 1 hit.
[Graphical view]
PROSITEiPS50983. FE_B12_PBP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RCF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRINITMKNI FILLSVILGC LFSGFVSAQQ NVWPRTFQNA DGSITTIPSQ
60 70 80 90 100
PKRILSTAVT VTGTLLAIDA PVIASAATTQ STFFEQWRKL AELRQVKKLW
110 120 130 140 150
PAGSVDLESV YVEQPDLIVV SMIGADSARD QIPLLQAIAP TILVDYSDQT
160 170 180 190 200
WQSLAQQLGL ATGLEEQAER TIHNFEQWTK QVRDVLDLPK GRANIVSYHG
210 220 230 240 250
PGVVNAVAKA QSAHAQLLQS VGVVLEEPDP AWQAGSIVHR DFLRIHYEHL
260 270 280 290 300
TQLQAETTFL ITMTDQQAQA FLHDPILKNL PSIQRKQVYG LGENSFRIDL
310 320
FSAREIINSL LRRFAGEQAQ SLVMP
Length:325
Mass (Da):36,092
Last modified:May 1, 2000 - v1
Checksum:iB18EF2241644BE23
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52150 Genomic DNA. Translation: AAD48880.1.
CWOW01000013 Genomic DNA. Translation: CSA85225.1.
CWPO01000010 Genomic DNA. Translation: CSB49027.1.
CWQG01000002 Genomic DNA. Translation: CSB59728.1.
CWQD01000002 Genomic DNA. Translation: CSB68015.1.
CWPL01000014 Genomic DNA. Translation: CSB77292.1.
CWPZ01000006 Genomic DNA. Translation: CSB84864.1.
CWQX01000004 Genomic DNA. Translation: CSC04069.1.
CWRE01000067 Genomic DNA. Translation: CSD02258.1.
PIRiA82281.

Genome annotation databases

EnsemblBacteriaiCRZ47004; CRZ47004; ERS013220_01861.
CSA67680; CSA67680; ERS013164_02065.
CSA85225; CSA85225; ERS013165_02595.
CSB49027; CSB49027; ERS013186_02145.
CSB51352; CSB51352; ERS013194_01665.
CSB59728; CSB59728; ERS013202_00573.
CSB68015; CSB68015; ERS013206_00558.
CSB77292; CSB77292; ERS013262_00479.
CSB84864; CSB84864; ERS013207_01480.
CSC04069; CSC04069; ERS013199_00569.
CSD02258; CSD02258; ERS013140_02227.
PATRICi20080663. VBIVibCho83274_0740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52150 Genomic DNA. Translation: AAD48880.1.
CWOW01000013 Genomic DNA. Translation: CSA85225.1.
CWPO01000010 Genomic DNA. Translation: CSB49027.1.
CWQG01000002 Genomic DNA. Translation: CSB59728.1.
CWQD01000002 Genomic DNA. Translation: CSB68015.1.
CWPL01000014 Genomic DNA. Translation: CSB77292.1.
CWPZ01000006 Genomic DNA. Translation: CSB84864.1.
CWQX01000004 Genomic DNA. Translation: CSC04069.1.
CWRE01000067 Genomic DNA. Translation: CSD02258.1.
PIRiA82281.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3R5SX-ray1.79A29-325[»]
3R5TX-ray1.45A29-325[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi345073.VC0395_A0305.

Protein family/group databases

TCDBi3.A.1.14.6. the atp-binding cassette (abc) superfamily.

Protocols and materials databases

DNASUi2615319.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCRZ47004; CRZ47004; ERS013220_01861.
CSA67680; CSA67680; ERS013164_02065.
CSA85225; CSA85225; ERS013165_02595.
CSB49027; CSB49027; ERS013186_02145.
CSB51352; CSB51352; ERS013194_01665.
CSB59728; CSB59728; ERS013202_00573.
CSB68015; CSB68015; ERS013206_00558.
CSB77292; CSB77292; ERS013262_00479.
CSB84864; CSB84864; ERS013207_01480.
CSC04069; CSC04069; ERS013199_00569.
CSD02258; CSD02258; ERS013140_02227.
PATRICi20080663. VBIVibCho83274_0740.

Phylogenomic databases

eggNOGiENOG4105PEC. Bacteria.
COG4592. LUCA.

Family and domain databases

InterProiIPR002491. ABC_transptr_periplasmic_BD.
[Graphical view]
PfamiPF01497. Peripla_BP_2. 1 hit.
[Graphical view]
PROSITEiPS50983. FE_B12_PBP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning of a Vibrio cholerae vibriobactin gene cluster: identification of genes required for early steps in siderophore biosynthesis."
    Wyckoff E.E., Stoebner J.A., Reed K.E., Payne S.M.
    J. Bacteriol. 179:7055-7062(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Lou15Imported.
  2. "A multifunctional ATP-binding cassette transporter system from Vibrio cholerae transports vibriobactin and enterobactin."
    Wyckoff E.E., Valle A.M., Smith S.L., Payne S.M.
    J. Bacteriol. 181:7588-7596(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Lou15Imported.
  3. "Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response."
    Li N., Zhang C., Li B., Liu X., Huang Y., Xu S., Gu L.
    J. Biol. Chem. 287:8912-8919(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS) OF 29-325.
  4. Informatics Pathogen
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4660Imported, A232Imported, A346Imported, A346(2)Imported, A481Imported, A482Imported, A487Imported, A487(2)Imported, A51Imported and GP106Imported.

Entry informationi

Entry nameiQ9RCF6_VIBCL
AccessioniPrimary (citable) accession number: Q9RCF6
Secondary accession number(s): Q7DCW3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 11, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.