Unreviewed, UniProtKB/TrEMBL Q9RC94 (Q9RC94_9BACI)

Names and origin

Protein names

Recommended name:
    Endo-1,4-beta-xylanase RuleBase RU004392V0
    EC=3.2.1.8

Gene names

Name:

xynJ EMBL BAA82316.1

Organism

Bacillus sp. 41M-1 EMBL BAA82316.1

Taxonomic identifier

98930 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Catalytic activity	Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392V0
Pathway	Glycan degradation; xylan degradation. RuleBase RU004392V0
Sequence similarities	Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433V0
Molecular function	Glycosidase RuleBase RU003433V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	28 – 354	327	xylanase J EMBL BAA82316.1		PRO_5000049413

Sequences

	Sequence		Length	Mass (Da)
	Q9RC94-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 5F81EBB473151DC8	FASTA	354	39,000
	10 20 30 40 50 60 MKQVKIMFLM TMFLGIGLLF FSENAEAAIT SNEIGTHDGY DYEFWKDSGG SGSMTLNSGG 70 80 90 100 110 120 TFSAQWSNVN NILFRKGKKF DETQTHQQIG NMSINYGATY NPNGNSYLTV YGWTVDPLVE 130 140 150 160 170 180 FYIVDSWGTW RPPGGTPKGT INVDGGTYQI YETTRYNQPS IKGTATFQQY WSVRTSKRTS 190 200 210 220 230 240 GTISVSEHFR AWESLGMNMG NMYEVALTVE GYQSSGSANV YSNTLTIGGQ SGGEQATRVE 250 260 270 280 290 300 AESMTKGGPY TSNITSPFNG VALYANGDNV SFNHSFTKAN SSFSLRGASN NSNMARVDLR 310 320 330 340 350 IGGQNRGTFY FGDQYPAVYT INNINHGIGN QLVELIVTAD DGTWDAYLDY LEIR

References

[1]	"Nucleotide sequence and mutational analysis of the gene encoding the novel alkaline xylanase from alkaliphilic Bacillus sp. strain 41M-1." Nakai R., Wakabayashi K., Asano T., Aono R., Horikoshi K., Nakamura S. Nucleic Acids Symp. Ser. 31:235-236(1994) Cited for: NUCLEOTIDE SEQUENCE. Strain: 41M-1 EMBL BAA82316.1.
[2]	Nakamura S., Nakai R., Wakabayashi K. Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 41M-1 EMBL BAA82316.1.

Cross-references

Sequence databases

EMBLGenBankDDBJ

AB029319 Genomic DNA. Translation: BAA82316.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2DCJ	X-ray	2.24	A/B	1-354	[»]
2DCK	X-ray	2.10	A	1-354	[»]

ModBase

Search...

Protein family/group databases

CAZy

CBM36. Carbohydrate-Binding Module Family 36.
GH11. Glycoside Hydrolase Family 11.

Family and domain databases

InterPro

IPR005084. CBM_6.
IPR001137. Glyco_hydro_11.
IPR013319. Glyco_hydro_11/12_cat.
IPR018208. Glyco_hydro_11_AS.
[Graphical view]

Gene3D

G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.

Pfam

PF03422. CBM_6. 1 hit.
PF00457. Glyco_hydro_11. 1 hit.
[Graphical view]

PRINTS

PR00911. GLHYDRLASE11.

PROSITE

PS51175. CBM6. 1 hit.
PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit.
PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9RC94_9BACI

Accession

Primary (citable) accession number: Q9RC94

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)