Q9RB42 (Q9RB42_9CORY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polyguluronate lyase EMBL BAA83339.1
EC=4.2.2.11 EMBL BAA83339.1

Gene names

Name:

alyPG EMBL BAA83339.1

Organism

Corynebacterium sp. ALY-1 EMBL BAA83339.1

Taxonomic identifier

101519 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

Ontologies

Keywords
Domain	Signal EMBL BAA83339.1
Molecular function	Lyase EMBL BAA83339.1
Technical term	3D-structure PDB 1UAI
Gene Ontology (GO)
Molecular function	poly(alpha-L-guluronate) lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	EMBL BAA83339.1
	Chain	33 – 256	224	polyguluronate lyase EMBL BAA83339.1		PRO_5000049424

Sequences

	Sequence		Length	Mass (Da)
	Q9RB42 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: CCF821C77254E1EF	FASTA	256	27,344
	10 20 30 40 50 60 MTLTRKRGLT AALTATALLV GSMVVGGSGA AAAEPCDYPA QQLDLTDWKV TLPIGSSGKP 70 80 90 100 110 120 SEIEQPALDT FATAPWFQVN AKCTGVQFRA AVNGVTTSGS GYPRSELREM TDGGEEKASW 130 140 150 160 170 180 SATSGTHTMV FREAFNHLPE VKPHLVGAQI HDGDDDVTVF RLEGTSLYIT KGDDTHHKLV 190 200 210 220 230 240 TSDYKLNTVF EGKFVVSGGK IKVYYNGVLQ TTISHTSSGN YFKAGAYTQA NCSNSSPCSS 250 SNYGQVSLYK LQVTHS

References

[1]	"Cloning and sequence analysis of a gene (alyPG) encoding polyguluronate lyase from Corynebacterium sp. ALY-1 strain." Matsubara Y., Kawada R., Iwasaki K., Kimura Y., Oda T., Muramatsu T. Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ALY-1 EMBL BAA83339.1.
[2]	"Crystal structure of the alginate (poly alpha-l-guluronate) lyase from Corynebacterium sp. at 1.2 A resolution." Osawa T., Matsubara Y., Muramatsu T., Kimura M., Kakuta Y. J. Mol. Biol. 345:1111-1118(2005) [PubMed: 15644208] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS) OF 33-256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB030481 Genomic DNA. Translation: BAA83339.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1UAI	X-ray	1.20	A	33-256	[»]

ProteinModelPortal

Q9RB42.

SMR

Q9RB42. Positions 34-256.

ModBase

Search...

Protein family/group databases

CAZy

PL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Enzyme and pathway databases

BRENDA

4.2.2.11. 586.

Family and domain databases

InterPro

IPR014895. Alginate_lyase_2.
IPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
[Graphical view]

Gene3D

G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.

Pfam

PF08787. Alginate_lyase2. 1 hit.
[Graphical view]

SUPFAM

SSF49899. ConA_like_lec_gl. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q9RB42_9CORY

Accession

Primary (citable) accession number: Q9RB42

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 11, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)