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Protein
Submitted name:

Vacuolating cytotoxin

Gene

vacA

Organism
Helicobacter pylori (Campylobacter pylori)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Vacuolating cytotoxinImported
Gene namesi
Name:vacAImported
OrganismiHelicobacter pylori (Campylobacter pylori)Imported
Taxonomic identifieri210 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ9R962.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1018 – 1291Autotransporter (TC 1.B.12)InterPro annotationAdd BLAST274

Family and domain databases

Gene3Di2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR006315. OM_autotransptr_brl.
IPR003842. Vacuolating_cytotoxin.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
PF02691. VacA. 1 hit.
[Graphical view]
PRINTSiPR01656. VACCYTOTOXIN.
SMARTiSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMiSSF103515. SSF103515. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9R962-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQQTHRKI NRPLVSLALV GLLVSITPQK SHAAFFTTVI IPAIVGGIAT
60 70 80 90 100
GAAVGTVSGL LGWGLKQAEE ANKTPDKPDK VWRIQAGRGF NEFPNKEYDL
110 120 130 140 150
YKSLLSSKID GGWDWGNAAR HYWVKGGQWN KLEVDMKDAV GTYKLSGLRN
160 170 180 190 200
YTGGDLDVNM QKATLRLGQF NGNSFTSFKD SADRTTRVDF NAKNILIDNF
210 220 230 240 250
LEINNRVGSG AGRKASSTVL TLQASEGITS GKNAEISLYD GATLNLASNS
260 270 280 290 300
VKLMGNVWMG RLQYVGAYLA PSYSTINTSK VTGEVNFNHL TVGDRNAAQA
310 320 330 340 350
GIIASKKTYI GTLDLWQSAG LNIIAPPEGG YKDNLNNTNS QSGAKSDKNE
360 370 380 390 400
SAKNDKQDSN TQVINPPNSG QKTEIQPTQV IDGPFAGAKD TVVNINRINT
410 420 430 440 450
NADGTIKVGG YTASLTTNAA HLNIGKGGVN LSNQASGRSL LVENLTGNIT
460 470 480 490 500
VDGALMVNNQ VGGYALAGSS ANFEFKAGVD TKNGTIAFNN NISLGRFVNL
510 520 530 540 550
KASAHTVNFK DIDTGNGGFN TLDFSGVTNK VNINKLITAS TNVAIKNFNI
560 570 580 590 600
NELLVKTNGI SVGEYTNFSE DIGNQSRINT VRLETGTRSI YSGGVKFKSG
610 620 630 640 650
EKLVINDFYY APWNYFDARN IKNVEITNKL AFGPQGSPWG TAKLMFNNLT
660 670 680 690 700
LGPNAVMDYS QFSNVTIQGN FVNNQGTINY LVRGGNIETL SVGNAAVMSF
710 720 730 740 750
NNDIDSATGF YKPLIKINSA QDLIKNKEHV LLKAKIIGYE NASLGTNSIS
760 770 780 790 800
NANLIEQFNE RLALYNNNNR MDTCVVRNTD DIKACGMAIG DQAMVNNPDN
810 820 830 840 850
YKYLIGKAWK NIGISKTANG SKISVRYLGN ATPAENGGNT TNLPTNTTNN
860 870 880 890 900
ARFASYALIK NAPFAQTSAT PSLVAINKHN FGTIESVFEL ANRSEDIDTL
910 920 930 940 950
YANSGAQGRD LLQTLLIDSH DAGYARTMID ATSTNEITKQ LNEANSALNN
960 970 980 990 1000
IASLDHKTSG LQTLSLSNAM ILNSRLVNLS RRHTNNIDSF ARRLQALKDQ
1010 1020 1030 1040 1050
RFASLESAAE VLYQFAPKYE KPTNVWANAI GGASLNSGGN TSLYGTSAGV
1060 1070 1080 1090 1100
DAYLNEKVEA IVGGFGSYGY SSFSNQANSL NSGANNANFG VYSRIFANQH
1110 1120 1130 1140 1150
EFDFEAQGAV GSDQSSLNFK GALLRDLNQS YNYLAYGASA RASYGYDFAF
1160 1170 1180 1190 1200
FRNALVLKPS VGVNYNHLGS TNFESNSTHK AALKNGASSQ HLFNASANVE
1210 1220 1230 1240 1250
ARYYYGDTSY FYMNAGVLQE FANFGSSNAV SLNTFKVNAA RNPLNTHARV
1260 1270 1280 1290
MMGGELKLAK EVFLNLGFIY LHNLISNIGH FASNLGMRYS F
Length:1,291
Mass (Da):139,348
Last modified:May 1, 2000 - v1
Checksum:iE54C91429E9DF920
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049629 Genomic DNA. Translation: AAD04268.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049629 Genomic DNA. Translation: AAD04268.1.

3D structure databases

ProteinModelPortaliQ9R962.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR006315. OM_autotransptr_brl.
IPR003842. Vacuolating_cytotoxin.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
PF02691. VacA. 1 hit.
[Graphical view]
PRINTSiPR01656. VACCYTOTOXIN.
SMARTiSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMiSSF103515. SSF103515. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9R962_HELPX
AccessioniPrimary (citable) accession number: Q9R962
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: October 5, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.