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Protein
Submitted name:

Cytochrome C3=26 kDa subunit of A dimeric class III C-type cytochrome

Gene
N/A
Organism
Desulfovibrio gigas
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi28Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi31Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei36Heme 1 (covalent)Combined sources1
Binding sitei39Heme 1 (covalent)Combined sources1
Metal bindingi40Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi41Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Binding sitei52Heme 4 (covalent)Combined sources1
Binding sitei55Heme 4 (covalent)Combined sources1
Metal bindingi56Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Metal bindingi73Iron (heme 2 axial ligand); via tele nitrogenCombined sources1
Binding sitei80Heme 3 (covalent)Combined sources1
Binding sitei83Heme 3 (covalent)Combined sources1
Metal bindingi84Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei99Heme 2 (covalent)Combined sources1
Binding sitei103Heme 2 (covalent)Combined sources1
Metal bindingi104Iron (heme 2 axial ligand); via tele nitrogenCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

HemeCombined sourcesImported, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome C3=26 kDa subunit of A dimeric class III C-type cytochrome
OrganismiDesulfovibrio gigasImported
Taxonomic identifieri879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi5Interchain (with C-46)Combined sources
Disulfide bondi46Interchain (with C-5)Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GYOX-ray1.20A/B1-109[»]
ProteinModelPortaliQ9R638.
SMRiQ9R638.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9R638.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 89Cytochrome cInterPro annotationAdd BLAST59

Family and domain databases

InterProiIPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
SUPFAMiSSF48695. SSF48695. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9R638-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LDVPCKVVIT APEGEDPHPR FGKVEMSHAK HRNVSCVSCH HMFDGCGDFQ
60 70 80 90 100
KCADCHIDRD DRSYERGFYK AWHSESEISC RGCHKAMKAK NEQTGPIGCL

QGCHEAAQK
Length:109
Mass (Da):12,217
Last modified:May 1, 2000 - v1
Checksum:i3F792DD7D2FA9F26
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GYOX-ray1.20A/B1-109[»]
ProteinModelPortaliQ9R638.
SMRiQ9R638.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ9R638.

Family and domain databases

InterProiIPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
SUPFAMiSSF48695. SSF48695. 1 hit.
PROSITEiPS51008. MULTIHEME_CYTC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9R638_DESGI
AccessioniPrimary (citable) accession number: Q9R638
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sourcesImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.