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Q9R230 (Q9R230_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Fas RGD 619831
Synonyms:Tnfrsf6 RGD 619831
OrganismRattus norvegicus (Rat) EMBL AAD20221.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length150 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionReceptor EMBL AAD20221.1
Gene Ontology (GO)
   Biological_processB cell mediated immunity

Inferred from electronic annotation. Source: Ensembl

activation-induced cell death of T cells

Inferred from electronic annotation. Source: Ensembl

cellular response to hyperoxia

Inferred from electronic annotation. Source: Ensembl

cellular response to lithium ion

Inferred from electronic annotation. Source: Ensembl

cellular response to mechanical stimulus

Inferred from electronic annotation. Source: Ensembl

extrinsic apoptotic signaling pathway in absence of ligand

Inferred from electronic annotation. Source: Ensembl

extrinsic apoptotic signaling pathway via death domain receptors

Inferred from electronic annotation. Source: Ensembl

gene expression

Inferred from electronic annotation. Source: Ensembl

immunoglobulin production

Inferred from electronic annotation. Source: Ensembl

inflammatory cell apoptotic process

Inferred from electronic annotation. Source: Ensembl

motor neuron apoptotic process

Inferred from electronic annotation. Source: Ensembl

negative regulation of B cell activation

Inferred from electronic annotation. Source: Ensembl

negative regulation of apoptotic process

Inferred from electronic annotation. Source: Ensembl

negative thymic T cell selection

Inferred from electronic annotation. Source: Ensembl

positive regulation of apoptotic process

Inferred from electronic annotation. Source: Ensembl

positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Inferred from electronic annotation. Source: Ensembl

positive regulation of necrotic cell death

Inferred from electronic annotation. Source: Ensembl

positive regulation of protein homooligomerization

Inferred from electronic annotation. Source: Ensembl

protein homooligomerization

Inferred from electronic annotation. Source: Ensembl

regulation of lymphocyte differentiation

Inferred from electronic annotation. Source: Ensembl

regulation of myeloid cell differentiation

Inferred from electronic annotation. Source: Ensembl

renal system process

Inferred from electronic annotation. Source: Ensembl

response to glucocorticoid

Inferred from electronic annotation. Source: Ensembl

response to toxic substance

Inferred from electronic annotation. Source: Ensembl

spleen development

Inferred from electronic annotation. Source: Ensembl

transformed cell apoptotic process

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentCD95 death-inducing signaling complex

Inferred from electronic annotation. Source: Ensembl

cytoplasm

Inferred from electronic annotation. Source: Ensembl

external side of plasma membrane

Inferred from electronic annotation. Source: Ensembl

extracellular region

Inferred from electronic annotation. Source: Ensembl

membrane raft

Inferred from electronic annotation. Source: Ensembl

nucleus

Inferred from electronic annotation. Source: Ensembl

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAD20221.1
Non-terminal residue1501 EMBL AAD20221.1

Sequences

Sequence LengthMass (Da)Tools
Q9R230 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 7DEC76EC40A6BA4F

FASTA15016,645
        10         20         30         40         50         60 
AVLPLVLAGP ELNVRMQGTD SISEGLELKR SVRETDNNCS EGLYQVGPFC CQPCQPGERK 

        70         80         90        100        110        120 
VKDCTTSGGA PTCHPCTEGE EYTDRKHYSD KCRRCAFCDE GHGLEVETNC TRTQNTKCRC 

       130        140        150 
KENFYCNASL CDHCYHCTSC GLEDILEPCT 

« Hide

References

[1]"Cloning and expression of Fas and Fas Ligand in the apoptotic rat corpus luteum."
Lareu R.R., Dharmarajan A.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL AAD20221.1.
Tissue: Corpus luteum EMBL AAD20221.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF104034 mRNA. Translation: AAD20221.1.
UniGeneRn.162521.

3D structure databases

ProteinModelPortalQ9R230.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD619831. Fas.

Phylogenomic databases

HOVERGENHBG004091.

Gene expression databases

GenevestigatorQ9R230.

Family and domain databases

InterProIPR008063. Fas_rcpt.
IPR001368. TNFR/NGFR_Cys_rich_reg.
[Graphical view]
PfamPF00020. TNFR_c6. 2 hits.
[Graphical view]
PRINTSPR01680. TNFACTORR6.
SMARTSM00208. TNFR. 2 hits.
[Graphical view]
PROSITEPS50050. TNFR_NGFR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9R230_RAT
AccessionPrimary (citable) accession number: Q9R230
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: February 19, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)