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Protein
Submitted name:

Voltage gated calcium channel alpha1B subunit

Gene

Cacna1b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Voltage gated calcium channel alpha1B subunitImported
Gene namesi
Name:Cacna1bImported
Synonyms:CACHA1BImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi628852. Cacna1b.

Expressioni

Gene expression databases

GenevestigatoriQ9R1B6.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063686.

Family & Domainsi

Family and domain databases

InterProiIPR005447. VDCC_N_a1su.
[Graphical view]
PANTHERiPTHR10037:SF161. PTHR10037:SF161. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q9R1B6-1 [UniParc]FASTAAdd to Basket

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        10         20         30 
ETNNFINLSF LRLFRAARLI KLLRQGYTIR ILL
Length:33
Mass (Da):3,978
Last modified:May 1, 2000 - v1
Checksum:i5C720AECC469A280
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei33 – 331Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF146632 Genomic DNA. Translation: AAD31922.1.
UniGeneiRn.85880.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF146632 Genomic DNA. Translation: AAD31922.1.
UniGeneiRn.85880.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063686.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi628852. Cacna1b.

Gene expression databases

GenevestigatoriQ9R1B6.

Family and domain databases

InterProiIPR005447. VDCC_N_a1su.
[Graphical view]
PANTHERiPTHR10037:SF161. PTHR10037:SF161. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Alternative splicing of a short cassette exon in alpha1B generates functionally distinct N-type calcium channels in central and peripheral neurons."
    Lin Z., Lin Y., Schorge S., Pan J.Q., Beierlein M., Lipscombe D.
    J. Neurosci. 19:5322-5331(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.
    Tissue: NeuronalImported.

Entry informationi

Entry nameiQ9R1B6_RAT
AccessioniPrimary (citable) accession number: Q9R1B6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 7, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.