Q9R0L6 (PCM1_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 71.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Pericentriolar material 1 protein Short name=PCM-1 Short name=mPCM-1 | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) [Reference proteome] | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 2025 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Required for centrosome assembly and function. Essential for the correct localization of several centrosomal proteins probably including CEP250, CETN3, PCNT and NEK2. Required to anchor microtubules to the centrosome. Probably involved in the biogenesis of cilia. Ref.9 |
| Subunit structure | Self-associates. Interacts with BBS4, BBS8, CETN3, HAP1, NDE1 and NDEL1 By similarity. |
| Subcellular location | Cytoplasm › cytoskeleton. Cytoplasm › cytoskeleton › centrosome. Cytoplasmic granule. Note: Localizes to cytoplasmic granules which are enriched around the centrosome. This centrosomal enrichment requires microtubules and dynein By similarity. The majority of the protein dissociates from the centrosome during metaphase and subsequently localizes to the cleavage site in telophase. Ref.1 Ref.9 Ref.10 Ref.11 |
| Tissue specificity | Expressed in the hippocampus and dentate gyrus, the columnar epithelial cells of bronchioles, the olfactory epithelium, the pericardium and the inner segment of the retina. Ref.13 |
| Developmental stage | Maternally derived during fertilization. Expressed in the pericardium of the developing embryo and in the epidermal layer surrounding the digits. Ref.9 |
| Sequence similarities | Belongs to the PCM1 family. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9R0L6-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9R0L6-2) The sequence of this isoform differs from the canonical sequence as follows: 263-263: R → RENEEEDVRTVDSAVGSGSVAESTSLNADVQSEASDTTAR |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2025 | 2025 | Pericentriolar material 1 protein | PRO_0000274038 | |||||
Regions | |||||||||
| Coiled coil | 218 – 301 | 84 | Potential | ||||||
| Coiled coil | 399 – 426 | 28 | Potential | ||||||
| Coiled coil | 492 – 518 | 27 | Potential | ||||||
| Coiled coil | 652 – 772 | 121 | Potential | ||||||
| Coiled coil | 822 – 856 | 35 | Potential | ||||||
| Coiled coil | 985 – 1017 | 33 | Potential | ||||||
| Coiled coil | 1061 – 1086 | 26 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 65 | 1 | Phosphoserine Ref.12 Ref.14 Ref.15 Ref.16 Ref.17 Ref.18 | ||||||
| Modified residue | 68 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 69 | 1 | Phosphoserine Ref.15 | ||||||
| Modified residue | 93 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 110 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 399 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 859 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 864 | 1 | Phosphoserine Ref.16 | ||||||
| Modified residue | 957 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1182 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1228 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1254 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1257 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1260 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1287 | 1 | Phosphoserine Ref.16 | ||||||
| Modified residue | 1432 | 1 | Phosphoserine Ref.16 | ||||||
| Modified residue | 1434 | 1 | Phosphoserine Ref.16 | ||||||
| Modified residue | 1654 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 1695 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1729 | 1 | Phosphoserine Ref.16 | ||||||
| Modified residue | 1766 | 1 | Phosphoserine Ref.12 Ref.15 Ref.16 | ||||||
| Modified residue | 1769 | 1 | Phosphoserine Ref.12 Ref.15 Ref.16 | ||||||
| Modified residue | 1777 | 1 | Phosphoserine Ref.15 | ||||||
| Modified residue | 1959 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1978 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 263 | 1 | R → RENEEEDVRTVDSAVGSGSV AESTSLNADVQSEASDTTAR in isoform 2. | VSP_022612 | |||||
Experimental info | |||||||||
| Sequence conflict | 305 | 1 | A → T in AAH53728. Ref.4 | ||||||
| Sequence conflict | 408 | 1 | Q → R in AAH53728. Ref.4 | ||||||
| Sequence conflict | 1216 | 1 | V → I in AAK39513. Ref.6 | ||||||
| Sequence conflict | 1329 | 1 | N → S in AAK39513. Ref.6 | ||||||
| Sequence conflict | 1819 | 1 | I → V in BAA87861. Ref.1 | ||||||
| Sequence conflict | 1819 | 1 | I → V in AAK21980. Ref.6 | ||||||
| Sequence conflict | 2018 – 2025 | 8 | ETVGAQSI → GKSYQF in BAC30604. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Centriolar satellites: molecular characterization, ATP-dependent movement toward centrioles and possible involvement in ciliogenesis." Kubo A., Sasaki H., Yuba-Kubo A., Tsukita S., Shiina N. J. Cell Biol. 147:969-980(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBCELLULAR LOCATION. |
| [2] | Erratum Kubo A., Sasaki H., Yuba-Kubo A., Tsukita S., Shiina N. J. Cell Biol. 147:1585-1585(1999) |
| [3] | "Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. Ponting C.P.PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-448 (ISOFORM 2). Strain: C57BL/6NCr. Tissue: Hematopoietic stem cell. |
| [5] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-443 (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1978-2025 (ISOFORMS 1/2). |
| [6] | "Comparative analysis of an evolutionary chromosomal breakpoint indicates a recent origin for the human 4q telomere." van Geel M., Bolland D.J., Carim Todd L., Frants R.R., Hewitt J.E., de Jong P.J. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-78 (ISOFORMS 1/2), NUCLEOTIDE SEQUENCE [MRNA] OF 41-2004 (ISOFORM 2), NUCLEOTIDE SEQUENCE [MRNA] OF 1922-2025 (ISOFORMS 1/2), NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1193-2025. Strain: 129S6/SvEvTac and C57BL/6J. Tissue: Placenta. |
| [7] | "High-resolution mapping of mouse chromosome 8 identifies an evolutionary chromosomal breakpoint." Grewal P.K., Bolland D.J., Todd L.C., Hewitt J.E. Mamm. Genome 9:603-607(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1722-1784. |
| [8] | "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." Okazaki Y., Furuno M., Kasukawa T., Adachi J., Bono H., Kondo S., Nikaido I., Osato N., Saito R., Suzuki H., Yamanaka I., Kiyosawa H., Yagi K., Tomaru Y., Hasegawa Y., Nogami A., Schonbach C., Gojobori T. Hayashizaki Y.Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1779-2005 (ISOFORMS 1/2). Strain: C57BL/6J. Tissue: Embryo. |
| [9] | "Arrest of cell cycle progression during first interphase in murine zygotes microinjected with anti-PCM-1 antibodies." Balczon R., Simerly C., Takahashi D., Schatten G. Cell Motil. Cytoskeleton 52:183-192(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE. |
| [10] | "Assembly of centrosomal proteins and microtubule organization depends on PCM-1." Dammermann A., Merdes A. J. Cell Biol. 159:255-266(2002) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [11] | "Non-membranous granular organelle consisting of PCM-1: subcellular distribution and cell-cycle-dependent assembly/disassembly." Kubo A., Tsukita S. J. Cell Sci. 116:919-928(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [12] | "Phosphoproteomic analysis of the developing mouse brain." Ballif B.A., Villen J., Beausoleil S.A., Schwartz D., Gygi S.P. Mol. Cell. Proteomics 3:1093-1101(2004) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65; SER-1766 AND SER-1769, MASS SPECTROMETRY. Tissue: Embryonic brain. |
| [13] | "The Bardet-Biedl protein BBS4 targets cargo to the pericentriolar region and is required for microtubule anchoring and cell cycle progression." Kim J.C., Badano J.L., Sibold S., Esmail M.A., Hill J., Hoskins B.E., Leitch C.C., Venner K., Ansley S.J., Ross A.J., Leroux M.R., Katsanis N., Beales P.L. Nat. Genet. 36:462-470(2004) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY. |
| [14] | "Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations." Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M. Mol. Cell. Proteomics 6:283-293(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65, MASS SPECTROMETRY. Tissue: Brain cortex. |
| [15] | "Large-scale phosphorylation analysis of mouse liver." Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65; SER-69; SER-1766; SER-1769 AND SER-1777, MASS SPECTROMETRY. Tissue: Liver. |
| [16] | "Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry." Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M. J. Proteome Res. 7:5314-5326(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65; SER-864; SER-1287; SER-1432; SER-1434; SER-1729; SER-1766 AND SER-1769, MASS SPECTROMETRY. Tissue: Melanoma. |
| [17] | "The phagosomal proteome in interferon-gamma-activated macrophages." Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P. Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65 AND SER-1654, MASS SPECTROMETRY. Tissue: Macrophage. |
| [18] | "Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry." Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J. Mol. Cell. Proteomics 8:904-912(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-65, MASS SPECTROMETRY. Tissue: Embryonic fibroblast. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB029291 mRNA. Translation: BAA87861.1. AC144926 Genomic DNA. No translation available. AC156554 Genomic DNA. No translation available. BC053728 mRNA. Translation: AAH53728.1. AK011147 mRNA. Translation: BAB27430.3. AK040482 mRNA. Translation: BAC30604.1. AK141516 mRNA. Translation: BAE24712.1. AY028080 Genomic DNA. Translation: AAK21980.1. AF352180 mRNA. Translation: AAK39513.1. AF369838 mRNA. Translation: AAK39564.1. AF369839 mRNA. Translation: AAK39565.1. AF039021 Genomic DNA. Translation: AAC96068.1. AK020493 mRNA. Translation: BAB32121.1. |
| IPI | IPI00127764. IPI00828325. |
| RefSeq | NP_076151.2. NM_023662.3. |
| UniGene | Mm.117896. |
3D structure databases | |
| ProteinModelPortal | Q9R0L6. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9R0L6. 2 interactions. |
PTM databases | |
| PhosphoSite | Q9R0L6. |
Proteomic databases | |
| PaxDb | Q9R0L6. |
| PRIDE | Q9R0L6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000045218; ENSMUSP00000039709; ENSMUSG00000031592. |
| GeneID | 18536. |
| KEGG | mmu:18536. |
| UCSC | uc009lns.1. mouse. |
Organism-specific databases | |
| CTD | 5108. |
| MGI | MGI:1277958. Pcm1. |
Phylogenomic databases | |
| eggNOG | NOG43239. |
| GeneTree | ENSGT00390000006641. |
| HOVERGEN | HBG053890. |
| KO | K16537. |
| OMA | PNSVNRN. |
| OrthoDB | EOG4Q84WK. |
Gene expression databases | |
| Bgee | Q9R0L6. |
| CleanEx | MM_PCM1. |
| Genevestigator | Q9R0L6. |
Family and domain databases | |
| InterPro | IPR024138. Pericentriolar_Pcm1. [Graphical view] |
| PANTHER | PTHR14164. PTHR14164. 1 hit. |
| ProtoNet | Search... |
Other | |
| ChiTaRS | PCM1. mouse. |
| NextBio | 294304. |
| SOURCE | Search... |
Entry information
| Entry name | PCM1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q9R0L6 Secondary accession number(s): E9QLK2 Q9CT57 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
