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Q9QYU6 (Q9QYU6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cpsf4 RGD 620440
Synonyms:CDK106 EMBL CAB56623.1
OrganismRattus norvegicus (Rat) EMBL CAB56623.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length229 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   LigandMetal-binding SAAS SAAS000571
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAB56623.1

Sequences

Sequence LengthMass (Da)Tools
Q9QYU6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 676B6F337A8B64D0

FASTA22925,930
        10         20         30         40         50         60 
GTRIASVDHI KFDLEIAVEQ QLGAQPLPFP GMDKSGAAVC EFFLKAACGK GGMCPFRHIS 

        70         80         90        100        110        120 
GEKTVVCKHW LRGLCKKGDQ CEFLHEYDMT KMPECYFYSK FGECSNKECP FLHIDPESKI 

       130        140        150        160        170        180 
KDCPWYDRGF CKHGPLQHRH TRRVICVNYL VGFCPEGTSC KFMHPRFELP MGTTEQPPLP 

       190        200        210        220 
QQNSSNKPKP PRSLGPAKSN TMQATGTPAP EQFLATICEK EDMCFRWFP 

« Hide

References

[1]Zaidi Q.J.
Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GK EMBL CAB56623.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y17326 mRNA. Translation: CAB56623.1.
UniGeneRn.104788.

3D structure databases

ProteinModelPortalQ9QYU6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD620440. Cpsf4.

Phylogenomic databases

HOVERGENHBG051108.

Gene expression databases

GenevestigatorQ9QYU6.

Family and domain databases

Gene3D4.10.1000.10. 2 hits.
InterProIPR000571. Znf_CCCH.
[Graphical view]
PfamPF00642. zf-CCCH. 2 hits.
[Graphical view]
SMARTSM00356. ZnF_C3H1. 5 hits.
[Graphical view]
PROSITEPS50103. ZF_C3H1. 5 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9QYU6_RAT
AccessionPrimary (citable) accession number: Q9QYU6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 22, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)