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Q9QYA6 (Q9QYA6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Electrogenic Na+ bicarbonate cotransporter EMBL AAF14856.1
Gene names
Name:Slc4a4 RGD 68936
Synonyms:nbc EMBL AAF14856.1
OrganismRattus norvegicus (Rat) EMBL AAF14856.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length1079 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functioninorganic anion exchanger activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9QYA6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 7DF08F1488A443DB

FASTA1,079121,353
        10         20         30         40         50         60 
MEDEAVLDRG ASFLKHVCDE EEVEGHHTIY IGVHVPKSYR RRRRHKRKTG HKEKKEKERI 

        70         80         90        100        110        120 
SENYSDKSDI ENADESSGSI LKPLISPAAE RIRFILGEED DSPAPPQLFT ELDELLAVDG 

       130        140        150        160        170        180 
QEMEWKETAR WIKFEEKVEQ GGERWSKPHV ATLSLHSLFE LRTCMEKGSI MLDREASSLP 

       190        200        210        220        230        240 
QLVEMIVDHQ IETGLLKPEL KDKVTYTLLR KHRHQTKKSN LRSLADIGKT VSSASRMFTN 

       250        260        270        280        290        300 
PDNGSPAMTH RNLTSSSLND ISEKPEKDQL KNKFMKKLPR DAEASNVLVG EVDFLDTPFI 

       310        320        330        340        350        360 
AFVRLQQAVM LGALTEVPVP TRFLFILLGP KGKAKSYHEI GRAIATLMSD EVFHDIAYKA 

       370        380        390        400        410        420 
KDRHDLIAGI DEFLDEVIVL PPGEWDPAIR IEPPKSLPSS DKRKNMYSGG ENVQMNGDTP 

       430        440        450        460        470        480 
HDGGHGGGGH GDCEELQRTG RFCGGLIKDI KRKAPFFASD FYDALNIQAL SAILFIYLAT 

       490        500        510        520        530        540 
VTNAITFGGL LGDATDNMQG VLESFLGTAV SGAIFCLFAG QPLTILSSTG PVLVFERLLF 

       550        560        570        580        590        600 
NFSKDNNFDY LEFRLWIGLW SAFLCLILVA TDASFLVQYF TRFTEEGFSS LISFIFIYDA 

       610        620        630        640        650        660 
FKKMVKLADY YPINSNFKVG YNTLFSCTCV PPDPANISIS NDTTLAPEYL PTMPSTDMYH 

       670        680        690        700        710        720 
NTTFDWAFLS KKECSKYGGN LVGNNCNFVP DITLMSFILF LGTYTSSMAL KKFKTSPYFP 

       730        740        750        760        770        780 
TTARKLISDF AIILSILIFC VIDALVGVDT PKLIVPSEFK PTSPNRGWFV PPFGENPWWV 

       790        800        810        820        830        840 
CLAAAIPALL VTILIFMDQQ ITAVIVNRKE HKLKKGAGYH LDLFWVAILM VICSLMALPW 

       850        860        870        880        890        900 
YVAATVISIA HIDSLKMETE TSAPGEQPKF LGVREQRVTG TLVFILTGLS VFMAPILKFI 

       910        920        930        940        950        960 
PMPVLYGVFL YRGVASLNGV QFMDRLKLLL MPLKHQPDFV YLRHVPLRGV HLFTFLQVLC 

       970        980        990       1000       1010       1020 
LALLWILKST VAAIIFPVMI LALVAVRKGM DYLFSQHDLS FLDDVIPEKD KKKKEDEKKK 

      1030       1040       1050       1060       1070 
KKKKGSLDSD NDDSDCPYSE KVPSIKIPMD IMEQQPFLSD SKPSDRERSP TFLERHTSC

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References

[1]"Cloning and immunolocalization of a rat pancreatic Na(+) bicarbonate cotransporter."
Thevenod F., Roussa E., Schmitt B.M., Romero M.F.
Biochem. Biophys. Res. Commun. 264:291-298(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Pancreas EMBL AAF14856.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF107265 mRNA. Translation: AAF14856.1.
IPIIPI00199985.
PIRPC7034.

3D structure databases

HSSPHSSP built from PDB template 1BNX based on UniProtKB P02730.
ProteinModelPortalQ9QYA6.
ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000004391.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD68936. Slc4a4.

Phylogenomic databases

HOVERGENHBG004326.

Gene expression databases

GenevestigatorQ9QYA6.

Family and domain databases

Gene3D3.40.1100.10. 1 hit.
InterProIPR013769. Band3_cytoplasmic_dom.
IPR011531. HCO3_transpt_C.
IPR003020. HCO3_transpt_euk.
IPR003024. Na/HCO3_transpt.
IPR016152. PTrfase/Anion_transptr.
[Graphical view]
PANTHERPTHR11453. PTHR11453. 1 hit.
PfamPF07565. Band_3_cyto. 1 hit.
PF00955. HCO3_cotransp. 1 hit.
[Graphical view]
PRINTSPR01231. HCO3TRNSPORT.
PR01232. NAHCO3TRSPRT.
SUPFAMSSF55804. PTrfase/Anion_transptr. 1 hit.
TIGRFAMsTIGR00834. ae. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9QYA6_RAT
AccessionPrimary (citable) accession number: Q9QYA6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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