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Protein
Submitted name:

TATA element modulatory factor

Gene

Tmf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
TATA element modulatory factorImported
Gene namesi
Name:Tmf1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi620551 Tmf1

PTM / Processingi

Proteomic databases

PRIDEiQ9QYA5

Expressioni

Gene expression databases

GenevisibleiQ9QYA5 RN

Structurei

3D structure databases

ProteinModelPortaliQ9QYA5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili451 – 492Sequence analysisAdd BLAST42
Coiled coili507 – 534Sequence analysisAdd BLAST28
Coiled coili548 – 568Sequence analysisAdd BLAST21
Coiled coili583 – 666Sequence analysisAdd BLAST84
Coiled coili676 – 713Sequence analysisAdd BLAST38
Coiled coili736 – 763Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IGA0 Eukaryota
ENOG410YE9Z LUCA
HOGENOMiHOG000154639
HOVERGENiHBG016599
KOiK20286
PhylomeDBiQ9QYA5

Family and domain databases

InterProiView protein in InterPro
IPR022092 TMF_DNA-bd
PfamiView protein in Pfam
PF12329 TMF_DNA_bd, 1 hit

Sequencei

Sequence statusi: Complete.

Q9QYA5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWAE AIPYGEPGIS
60 70 80 90 100
PSVSGGWDTS TWGLNSSSEP QSSPTASQAI TKPVRRTVVD ESENFFSAFL
110 120 130 140 150
SPSDVQTIQK SPVVSKPPAK SQRPEEEVKS SLQEPSSPGQ SRTSETAESE
160 170 180 190 200
ATDSACVSGE TPAVGTPSPV PEGKREETAS EESEGKVPTV RAKASESVVK
210 220 230 240 250
VNTAEDVSPT STQSLTTETK DMALEPKEQK HEDRQSNTPS PPVSSFSSGT
260 270 280 290 300
STTSDIEVLD HESVISESSA GSRQETSDAK SSLHLMQTSF QLLSASACPE
310 320 330 340 350
YGRLDDFQKL SESCCSSDAF ERIDSFSVQS LDSRSVSEIN SDDELPGRGY
360 370 380 390 400
ALVPIVVSPS APKTKVVEST EENVEEEEGK RDLIAPSEET ELEESGRSAT
410 420 430 440 450
PVNCDQPDTL ASPTPVNVGP SASGPAAEDG EAAENHPKAP QLEQEDVGKT
460 470 480 490 500
VEFLNEKLEK RETQLLSLSK EKALLEEAYD NLKDEMFRVK EESSSISSLK
510 520 530 540 550
DEFTQRTAEA ERKAQLACKE RDTAKKEMKT MKEELASRLN SSQTADLLKE
560 570 580 590 600
KDEQIQGLME EGEKLSKQQL HNSNMIKKLR AKDKDNESVI AKLKKKAKEL
610 620 630 640 650
EEELQHLRQV LDGKEEVEKQ HRENIKKLNS VVERQEKDLG RLQVDMNELE
660 670 680 690 700
EKSRSTQAAL DSAYRELTDL HKANAAKDSE VQEAALRREM KAKEELSGAL
710 720 730 740 750
EKAQEEARQQ QEILALQVGD LRLALQRAEQ AAARKEDYLR HEISELQQRL
760 770 780 790 800
QEAENRNQEL SQSVSSTTRP LLRQIENLQA TLGSQTSSWE MLEKNLSDRL
810
DLATERRALR LLGKLYH
Length:817
Mass (Da):90,264
Last modified:May 1, 2000 - v1
Checksum:iB432507F306FDAE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF107843 mRNA Translation: AAF21899.1
RefSeqiNP_446123.2, NM_053671.2
UniGeneiRn.91637

Genome annotation databases

GeneIDi114206
KEGGirno:114206
UCSCiRGD:620551 rat

Similar proteinsi

Entry informationi

Entry nameiQ9QYA5_RAT
AccessioniPrimary (citable) accession number: Q9QYA5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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