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Q9QY87 (Q9QY87_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Nfic RGD 62016
Synonyms:NFIC EMBL AAF23587.1
OrganismRattus norvegicus (Rat) EMBL AAF23587.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length144 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAF23587.1
Non-terminal residue1441 EMBL AAF23587.1

Sequences

Sequence LengthMass (Da)Tools
Q9QY87 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: D23D544A692A70AC

FASTA14416,672
        10         20         30         40         50         60 
LLPHVRAFAY TWFNLQARKR KYFKKHEKRM SKDEERAVKD ELLGEKAEVK QKWASRLLAK 

        70         80         90        100        110        120 
LRKDIRPECR EDFVLAVTGK KAPGCVLSNP DQKGKMRRID CLRQADKVWR LDLVMVILFK 

       130        140 
GIPLESTDGE RLVKAAASAH PVLC 

« Hide

References

[1]"Identification of NFI-binding sites and cloning of NFI-cDNAs suggest a regulatory role for NFI transcription factors in olfactory neuron gene expression."
Baumeister H., Gronostajski R.M., Lyons G.E., Margolis F.L.
Brain Res. Mol. Brain Res. 72:65-79(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Olfactory epithelium EMBL AAF23587.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF112458 mRNA. Translation: AAF23587.1.
UniGeneRn.86582.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:62016. rat.

Organism-specific databases

RGD62016. Nfic.

Phylogenomic databases

HOGENOMHOG000013028.
HOVERGENHBG006561.
InParanoidQ9QY87.

Gene expression databases

GenevestigatorQ9QY87.

Family and domain databases

InterProIPR000647. CTF/NFI.
IPR020604. CTF/NFI_DNA-bd-dom.
IPR019739. CTF/NFI_DNA-bd_CS.
IPR019548. CTF/NFI_DNA-bd_N.
IPR003619. MAD_homology1_Dwarfin-type.
[Graphical view]
PANTHERPTHR11492. PTHR11492. 1 hit.
PfamPF03165. MH1. 1 hit.
PF10524. NfI_DNAbd_pre-N. 1 hit.
[Graphical view]
SMARTSM00523. DWA. 1 hit.
[Graphical view]
PROSITEPS00349. CTF_NFI_1. 1 hit.
PS51080. CTF_NFI_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9QY87_RAT
AccessionPrimary (citable) accession number: Q9QY87
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: February 19, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)