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Q9QY06 (MYO9B_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 108. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Unconventional myosin-IXb
Alternative name(s):
Unconventional myosin-9b
Gene names
Name:Myo9b
Synonyms:Myr5
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length2114 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.

Subcellular location

Cytoplasmcell cortex By similarity. Cytoplasmperinuclear region By similarity. Cytoplasmcytoskeleton By similarity. Note: In undifferentiated cells colocalizes with F-actin in the cell periphery while in differentiated cells its localization is cytoplasmic with the highest levels in the perinuclear region By similarity.

Tissue specificity

Expressed in the brain, heart, muscle and inner ear.

Sequence similarities

Contains 4 IQ domains.

Contains 1 myosin head-like domain.

Contains 1 phorbol-ester/DAG-type zinc finger.

Contains 1 Ras-associating domain.

Contains 1 Rho-GAP domain.

Caution

Represents a unconventional myosin. This protein should not be confused with the conventional myosin-9 (MYH9).

Ontologies

Keywords
   Cellular componentCytoplasm
Cytoskeleton
   Coding sequence diversityAlternative splicing
Polymorphism
   DomainCoiled coil
Repeat
Zinc-finger
   LigandATP-binding
Actin-binding
Calmodulin-binding
Metal-binding
Nucleotide-binding
Zinc
   Molecular functionGTPase activation
Motor protein
Myosin
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processRho protein signal transduction

Inferred from mutant phenotype PubMed 20566876. Source: MGI

establishment of cell polarity

Inferred from mutant phenotype PubMed 20566876. Source: MGI

intracellular signal transduction

Inferred from electronic annotation. Source: InterPro

lamellipodium morphogenesis

Inferred from mutant phenotype PubMed 20566876. Source: MGI

macrophage chemotaxis

Inferred from mutant phenotype PubMed 20566876. Source: MGI

monocyte chemotaxis

Inferred from mutant phenotype PubMed 20566876. Source: MGI

positive regulation of GTPase activity

Inferred from electronic annotation. Source: GOC

   Cellular_componentcell cortex

Inferred from electronic annotation. Source: UniProtKB-SubCell

filopodium tip

Inferred from direct assay PubMed 17314409. Source: MGI

lamellipodium

Inferred from direct assay PubMed 17314409. Source: MGI

myosin complex

Inferred from electronic annotation. Source: UniProtKB-KW

perinuclear region of cytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

ruffle

Inferred from direct assay PubMed 17314409. Source: MGI

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

GTPase activator activity

Inferred from electronic annotation. Source: UniProtKB-KW

Rho GTPase activator activity

Inferred from direct assay PubMed 17314409. Source: MGI

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

microfilament motor activity

Inferred from direct assay PubMed 17314409. Source: MGI

Complete GO annotation...

Alternative products

This entry describes 3 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q9QY06-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q9QY06-2)

Also known as: Q;

The sequence of this isoform differs from the canonical sequence as follows:
     740-740: R → RCTGLDFSFERSEELDVNAFEDIMAFYESR
Isoform 3 (identifier: Q9QY06-3)

Also known as: C;

The sequence of this isoform differs from the canonical sequence as follows:
     1875-1890: Missing.
     1977-2114: GPPAPALPCP...LPPSSGQANG → E

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 21142114Unconventional myosin-IXb
PRO_0000123470

Regions

Domain1 – 939939Myosin head-like
Domain15 – 114100Ras-associating
Domain957 – 97721IQ 1
Domain979 – 100022IQ 2
Domain1001 – 102323IQ 3
Domain1024 – 105330IQ 4
Domain1661 – 1846186Rho-GAP
Nucleotide binding239 – 2468ATP Potential
Zinc finger1590 – 163950Phorbol-ester/DAG-type
Region844 – 85512Actin-binding
Region940 – 1044105Neck or regulatory domain
Region1045 – 21141070Tail
Coiled coil1562 – 159231 Potential
Coiled coil1839 – 185921 Potential
Coiled coil1915 – 194531 Potential

Amino acid modifications

Modified residue7161Phosphoserine By similarity
Modified residue11751Phosphoserine Ref.3 Ref.4
Modified residue12181Phosphoserine Ref.5
Modified residue12411Phosphoserine By similarity
Modified residue12641Phosphoserine By similarity
Modified residue13171Phosphothreonine By similarity
Modified residue13191Phosphothreonine Ref.2
Modified residue13251Phosphoserine Ref.3
Modified residue13711Phosphoserine By similarity
Modified residue19491Phosphoserine Ref.2

Natural variations

Alternative sequence7401R → RCTGLDFSFERSEELDVNAF EDIMAFYESR in isoform 2.
VSP_003363
Alternative sequence1875 – 189016Missing in isoform 3.
VSP_003364
Alternative sequence1977 – 2114138GPPAP…GQANG → E in isoform 3.
VSP_003365
Natural variant12431L → LEVSPVLPSSSL Only in strain C57BL/6; contains an in-frame 33 bp imperfect duplication.
Natural variant20831A → P.

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified June 20, 2001. Version 2.
Checksum: D774D4B1B2788045

FASTA2,114238,834
        10         20         30         40         50         60 
MSAHEAGSSG RRQQATYHLH IYPQLSSAGS QTSCRVTATK DSTTSDVIQD VVASLHLDGS 

        70         80         90        100        110        120 
KHYVLVEVKE SGGEEWVLDA SDSPVHRVLL WPRRAQDEHP QEDGYYFLLQ ERNADGSIQY 

       130        140        150        160        170        180 
LPIQLLAQPT AACRLVERGL LPRPQADFDD LCNLPELTEA NLLQNLKLRF MQQKIYTYAG 

       190        200        210        220        230        240 
SILVAINPFK FLPIYNPKYV KMYENQQLGK LEPHVFALAD VAYYAMLRKH VNQCIVISGE 

       250        260        270        280        290        300 
SGSGKTQSTN FLIHCLTALS QKGYASGVER TILGAGPVLE AFGNAKTAHN NNSSRFGKFI 

       310        320        330        340        350        360 
QVNYLENGIV RGAVVEKYLL EKSRLVSQEK DERNYHVFYY LLLGVSEEER LEFQLKQPQD 

       370        380        390        400        410        420 
YFYLNQHNLN IEDGEDLKHD FERLQQAMEM VGFLPATKKQ IFSVLSAILY LGNVTYKKRA 

       430        440        450        460        470        480 
TGRDEGLEVG PPEVLDTLSQ LLKVKRETLV EVLTKRKTVT VNDKLILPYS LSEAITARDS 

       490        500        510        520        530        540 
MAKSLYSALF DWIVLRINHA LLNKKDMEEA VSCLSIGVLD IFGFEDFERN SFEQFCINYA 

       550        560        570        580        590        600 
NEQLQYYFTQ HIFKLEQEEY QGEGISWHNI DYTDNVGCIH LISKKPTGLF YLLDEESNFP 

       610        620        630        640        650        660 
HATSHTLLAK FKQQHEDNKY FLGTPVLEPA FIIQHFAGRV KYQIKDFREK NMDYMRPDIV 

       670        680        690        700        710        720 
ALLRGSDSSY VRQLIGMDPV AVFRWAVLRA AIRAMAVLRE AGRLRAERAE KAAGISSPAT 

       730        740        750        760        770        780 
RSHMEELPRG ASTPSEKLYR DLHNQIIKSL KGLPWQGEDP RRLLQSLSLL QKPRTSFLKS 

       790        800        810        820        830        840 
KGIKQKQIIP KNLLDSKSLR LIISMTLHDR TTKSLLHLHK KKKPPSISAQ FQTSLNKLLE 

       850        860        870        880        890        900 
ALGKAEPFFI RCIRSNAEKK ELCFDDELVL QQLRYTGMLE TVRIRRSGYS AKYTFQDFTE 

       910        920        930        940        950        960 
QFQVLLPKDV QPCREAIAAL LEKLQVDRQN YQIGKTKVFL KETERQTLQE KLHGEVLRRI 

       970        980        990       1000       1010       1020 
LQLQSWFRMV LERKHFVQMK HAALTIQACW RSYRVRRALE RTQAAVYLQA AWRGYLQRQA 

      1030       1040       1050       1060       1070       1080 
YHHQRHSIIR LQSLCRGHLQ RRSFSQMVSE KQKAEQAREA AGGKLSEGEP GPVAAGEQLS 

      1090       1100       1110       1120       1130       1140 
EHPVEDPESL GVEAETWMNK SPDGMSPKKE TPSPEMETAA QKTVPAESHE KVSSSREKRE 

      1150       1160       1170       1180       1190       1200 
SRRQRGLEHV ERQNKHIQSC REESSTHREP SRRASLEIGE SFPEGTKGPR EDGLEAWTET 

      1210       1220       1230       1240       1250       1260 
TAPSSSKQAQ VVGDPPGSPS PVQRPTTLAL DSRVSPMLPS SSLESPKDKD KDESSTKAQD 

      1270       1280       1290       1300       1310       1320 
KPESPSGSTQ IQRYQHPDTE RLATAVEIWR GKKLASAVLS QSLDLSEKHR ATGAALTPTE 

      1330       1340       1350       1360       1370       1380 
ERRISFSTSD ISKLSPVKTS AEIDGDFSSK KPSIHKKKSG DPSAGPDAGL SPGSQGDSKS 

      1390       1400       1410       1420       1430       1440 
AFKRLFLHKA KDKKPSLEGV EETESNGGQA AQETPARKTL DVPSSQQHRH TTGEKPLKGK 

      1450       1460       1470       1480       1490       1500 
KNRNRKVGQI TVSEKWRESV FRKITNANEL KFLDEFLLNK VNDLRSQKTP IESLFIEATE 

      1510       1520       1530       1540       1550       1560 
RFRSNIKTMY SVPNGKIHVG YKDLMENYQI VVSNLAAERG EKDTNLVLNV FQSLLDEFTR 

      1570       1580       1590       1600       1610       1620 
SYNKTDFERA KSKAQKKKRK QERAVQEHNG HVFASYQVNI PQSCEQCLSY IWLMDKALLC 

      1630       1640       1650       1660       1670       1680 
SVCKMTCHKK CVHKIQSYCS YTGRRKSELG AEPGHFGVCV DSLTSDKASV PIVLEKLLEH 

      1690       1700       1710       1720       1730       1740 
VEMHGLYTEG LYRKSGAANR TRELRQALQT DPAAVKLEDF PIHAITGVLK QWLRELPEPL 

      1750       1760       1770       1780       1790       1800 
MTFAQYGDFL RAVELPEKQE QLSAIYAVLD HLPEANHTSL ERLIFHLVKV ALLEDVNRMS 

      1810       1820       1830       1840       1850       1860 
PGALAIIFAP CLLRCPDNSD PLTSMKDVLK ITTCVEMLIK EQMRKYKMKM EEINHLEAAE 

      1870       1880       1890       1900       1910       1920 
SIAFRRLSLL RQNAPWPLKL GFSSPYEGVR IKSPRTPVVQ DLELGALSEE AAGGDEDREK 

      1930       1940       1950       1960       1970       1980 
EILMERIQSI KEEKEDITYR LPELDPRGSD EENLDSETSA STESLLEERG VRGAVEGPPA 

      1990       2000       2010       2020       2030       2040 
PALPCPISPT LSPLPEAAAP PRGRPTSFVT VRVKTPRRTP IMPMANIKLP PGLPLHLTSW 

      2050       2060       2070       2080       2090       2100 
APALQEAVVP VKRREPPARR QDQVHSVYIA PGADLPSQST LIALDHDTIL PGTKRRYSDP 

      2110 
PTYCLPPSSG QANG 

« Hide

Isoform 2 (Q) [UniParc].

Checksum: 842A3BEEE32F48E7
Show »

FASTA2,143242,238
Isoform 3 (C) [UniParc].

Checksum: AEC7450E4B7307BF
Show »

FASTA1,961222,444

References

« Hide 'large scale' references
[1]"Cloning of the murine unconventional myosin gene Myo9b and identification of alternative splicing."
Grewal P.K., Jones A.-M., Maconochie M., Lemmers R.J.F., Frants R.R., Hewitt J.E.
Gene 240:389-398(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], ALTERNATIVE SPLICING, VARIANTS.
Strain: C57BL/6.
[2]"Large-scale phosphorylation analysis of mouse liver."
Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-1319 AND SER-1949, MASS SPECTROMETRY.
Tissue: Liver.
[3]"Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry."
Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M.
J. Proteome Res. 7:5314-5326(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1175 AND SER-1325, MASS SPECTROMETRY.
Tissue: Melanoma.
[4]"The phagosomal proteome in interferon-gamma-activated macrophages."
Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1175, MASS SPECTROMETRY.
Tissue: Macrophage.
[5]"Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry."
Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J.
Mol. Cell. Proteomics 8:904-912(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1218, MASS SPECTROMETRY.
Tissue: Embryonic fibroblast.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF143687 Genomic DNA. Translation: AAF00122.1.
AF143685 mRNA. Translation: AAF00120.1.
AF143686 mRNA. Translation: AAF00121.1. Frameshift.
AF143683 mRNA. Translation: AAF00118.1.
IPIIPI00135379.
IPI00229766.
IPI00319697.
UniGeneMm.33779.

3D structure databases

ProteinModelPortalQ9QY06.
SMRQ9QY06. Positions 141-1055, 1591-1842.
ModBaseSearch...

PTM databases

PhosphoSiteQ9QY06.

Proteomic databases

PaxDbQ9QY06.
PRIDEQ9QY06.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc009mcj.2. mouse.
uc009mck.1. mouse.

Organism-specific databases

MGIMGI:106624. Myo9b.

Phylogenomic databases

eggNOGCOG5022.
HOGENOMHOG000113707.
HOVERGENHBG052558.
OrthoDBEOG408N75.

Gene expression databases

CleanExMM_MYO9B.
GenevestigatorQ9QY06.
GermOnlineENSMUSG00000004677. Mus musculus.

Family and domain databases

Gene3D1.10.555.10. 1 hit.
InterProIPR000048. IQ_motif_EF-hand-BS.
IPR001609. Myosin_head_motor_dom.
IPR002219. Prot_Kinase_C-like_PE/DAG-bd.
IPR000159. Ras-assoc.
IPR008936. Rho_GTPase_activation_prot.
IPR000198. RhoGAP_dom.
[Graphical view]
PfamPF00612. IQ. 4 hits.
PF00063. Myosin_head. 1 hit.
PF00788. RA. 1 hit.
PF00620. RhoGAP. 1 hit.
[Graphical view]
PRINTSPR00193. MYOSINHEAVY.
SMARTSM00109. C1. 1 hit.
SM00015. IQ. 4 hits.
SM00242. MYSc. 1 hit.
SM00314. RA. 1 hit.
SM00324. RhoGAP. 1 hit.
[Graphical view]
SUPFAMSSF48350. Rho_GAP. 1 hit.
PROSITEPS50096. IQ. 3 hits.
PS50200. RA. 1 hit.
PS50238. RHOGAP. 1 hit.
PS00479. ZF_DAG_PE_1. 1 hit.
PS50081. ZF_DAG_PE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameMYO9B_MOUSE
AccessionPrimary (citable) accession number: Q9QY06
Secondary accession number(s): Q9QY07, Q9QY08, Q9QY09
Entry history
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: June 20, 2001
Last modified: May 1, 2013
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families