Q9QY06 (MYO9B_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 108.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Unconventional myosin-IXb Alternative name(s): Unconventional myosin-9b | ||||
| Gene names |
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| Organism | Mus musculus (Mouse) [Reference proteome] | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 2114 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho. |
| Subcellular location | Cytoplasm › cell cortex By similarity. Cytoplasm › perinuclear region By similarity. Cytoplasm › cytoskeleton By similarity. Note: In undifferentiated cells colocalizes with F-actin in the cell periphery while in differentiated cells its localization is cytoplasmic with the highest levels in the perinuclear region By similarity. |
| Tissue specificity | Expressed in the brain, heart, muscle and inner ear. |
| Sequence similarities | Contains 4 IQ domains. Contains 1 myosin head-like domain. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 Ras-associating domain. Contains 1 Rho-GAP domain. |
| Caution | Represents a unconventional myosin. This protein should not be confused with the conventional myosin-9 (MYH9). |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9QY06-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9QY06-2) Also known as: Q; The sequence of this isoform differs from the canonical sequence as follows: 740-740: R → RCTGLDFSFERSEELDVNAFEDIMAFYESR | ||||||
| Isoform 3 (identifier: Q9QY06-3) Also known as: C; The sequence of this isoform differs from the canonical sequence as follows: 1875-1890: Missing. 1977-2114: GPPAPALPCP...LPPSSGQANG → E |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2114 | 2114 | Unconventional myosin-IXb | PRO_0000123470 | |||||
Regions | |||||||||
| Domain | 1 – 939 | 939 | Myosin head-like | ||||||
| Domain | 15 – 114 | 100 | Ras-associating | ||||||
| Domain | 957 – 977 | 21 | IQ 1 | ||||||
| Domain | 979 – 1000 | 22 | IQ 2 | ||||||
| Domain | 1001 – 1023 | 23 | IQ 3 | ||||||
| Domain | 1024 – 1053 | 30 | IQ 4 | ||||||
| Domain | 1661 – 1846 | 186 | Rho-GAP | ||||||
| Nucleotide binding | 239 – 246 | 8 | ATP Potential | ||||||
| Zinc finger | 1590 – 1639 | 50 | Phorbol-ester/DAG-type | ||||||
| Region | 844 – 855 | 12 | Actin-binding | ||||||
| Region | 940 – 1044 | 105 | Neck or regulatory domain | ||||||
| Region | 1045 – 2114 | 1070 | Tail | ||||||
| Coiled coil | 1562 – 1592 | 31 | Potential | ||||||
| Coiled coil | 1839 – 1859 | 21 | Potential | ||||||
| Coiled coil | 1915 – 1945 | 31 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 716 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1175 | 1 | Phosphoserine Ref.3 Ref.4 | ||||||
| Modified residue | 1218 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 1241 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1264 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1317 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 1319 | 1 | Phosphothreonine Ref.2 | ||||||
| Modified residue | 1325 | 1 | Phosphoserine Ref.3 | ||||||
| Modified residue | 1371 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1949 | 1 | Phosphoserine Ref.2 | ||||||
Natural variations | |||||||||
| Alternative sequence | 740 | 1 | R → RCTGLDFSFERSEELDVNAF EDIMAFYESR in isoform 2. | VSP_003363 | |||||
| Alternative sequence | 1875 – 1890 | 16 | Missing in isoform 3. | VSP_003364 | |||||
| Alternative sequence | 1977 – 2114 | 138 | GPPAP…GQANG → E in isoform 3. | VSP_003365 | |||||
| Natural variant | 1243 | 1 | L → LEVSPVLPSSSL Only in strain C57BL/6; contains an in-frame 33 bp imperfect duplication. | ||||||
| Natural variant | 2083 | 1 | A → P. | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of the murine unconventional myosin gene Myo9b and identification of alternative splicing." Grewal P.K., Jones A.-M., Maconochie M., Lemmers R.J.F., Frants R.R., Hewitt J.E. Gene 240:389-398(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], ALTERNATIVE SPLICING, VARIANTS. Strain: C57BL/6. |
| [2] | "Large-scale phosphorylation analysis of mouse liver." Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-1319 AND SER-1949, MASS SPECTROMETRY. Tissue: Liver. |
| [3] | "Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry." Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M. J. Proteome Res. 7:5314-5326(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1175 AND SER-1325, MASS SPECTROMETRY. Tissue: Melanoma. |
| [4] | "The phagosomal proteome in interferon-gamma-activated macrophages." Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P. Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1175, MASS SPECTROMETRY. Tissue: Macrophage. |
| [5] | "Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry." Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J. Mol. Cell. Proteomics 8:904-912(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1218, MASS SPECTROMETRY. Tissue: Embryonic fibroblast. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF143687 Genomic DNA. Translation: AAF00122.1. AF143685 mRNA. Translation: AAF00120.1. AF143686 mRNA. Translation: AAF00121.1. Frameshift. AF143683 mRNA. Translation: AAF00118.1. |
| IPI | IPI00135379. IPI00229766. IPI00319697. |
| UniGene | Mm.33779. |
3D structure databases | |
| ProteinModelPortal | Q9QY06. |
| SMR | Q9QY06. Positions 141-1055, 1591-1842. |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q9QY06. |
Proteomic databases | |
| PaxDb | Q9QY06. |
| PRIDE | Q9QY06. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| UCSC | uc009mcj.2. mouse. uc009mck.1. mouse. |
Organism-specific databases | |
| MGI | MGI:106624. Myo9b. |
Phylogenomic databases | |
| eggNOG | COG5022. |
| HOGENOM | HOG000113707. |
| HOVERGEN | HBG052558. |
| OrthoDB | EOG408N75. |
Gene expression databases | |
| CleanEx | MM_MYO9B. |
| Genevestigator | Q9QY06. |
| GermOnline | ENSMUSG00000004677. Mus musculus. |
Family and domain databases | |
| Gene3D | 1.10.555.10. 1 hit. |
| InterPro | IPR000048. IQ_motif_EF-hand-BS. IPR001609. Myosin_head_motor_dom. IPR002219. Prot_Kinase_C-like_PE/DAG-bd. IPR000159. Ras-assoc. IPR008936. Rho_GTPase_activation_prot. IPR000198. RhoGAP_dom. [Graphical view] |
| Pfam | PF00612. IQ. 4 hits. PF00063. Myosin_head. 1 hit. PF00788. RA. 1 hit. PF00620. RhoGAP. 1 hit. [Graphical view] |
| PRINTS | PR00193. MYOSINHEAVY. |
| SMART | SM00109. C1. 1 hit. SM00015. IQ. 4 hits. SM00242. MYSc. 1 hit. SM00314. RA. 1 hit. SM00324. RhoGAP. 1 hit. [Graphical view] |
| SUPFAM | SSF48350. Rho_GAP. 1 hit. |
| PROSITE | PS50096. IQ. 3 hits. PS50200. RA. 1 hit. PS50238. RHOGAP. 1 hit. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| SOURCE | Search... |
Entry information
| Entry name | MYO9B_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q9QY06 Secondary accession number(s): Q9QY07, Q9QY08, Q9QY09 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
