Q9QX38 (Q9QX38_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Neuropilin EMBL AAC53345.1

Gene names

Name:

Nrp1 RGD 621588

Organism

Rattus norvegicus (Rat) EMBL AAC53345.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	921 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 2 F5/8 type C domains. RuleBase RU003308

Ontologies

Gene Ontology (GO)
Biological_process	angiogenesis Inferred from electronic annotation. Source: InterPro axon guidance Inferred from electronic annotation. Source: InterPro cell adhesion Inferred from electronic annotation. Source: InterPro endothelial cell chemotaxis Inferred from electronic annotation. Source: InterPro organ morphogenesis Inferred from electronic annotation. Source: InterPro vascular endothelial growth factor receptor signaling pathway Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	semaphorin receptor activity Inferred from electronic annotation. Source: InterPro vascular endothelial growth factor-activated receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9QX38 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 58B29A9AA4978971	FASTA	921	103,052
	10 20 30 40 50 60 MERGLPLLCA TLALALALGA FRSDKCGGTI KIENPGYLTS PGYPHSYHPS EKCEWLIQAP 70 80 90 100 110 120 EPYQRIMINF NPHFDLEDRD CKYDYVEVID GENEGGRLWG KFCGKIAPSP VVSSGPFLFI 130 140 150 160 170 180 KFVSDYETHG AGFSIRYEIF KRGPECSQNY TAPTGVIKSP GFPEKYPNSL ECTYIIFAPK 190 200 210 220 230 240 MSEIILEFES FDLEQDSNPP GGMFCRYDRL EIWDGFPEVG PHIGRYCGQK TPGRIRSSSG 250 260 270 280 290 300 ILSMVFYTDS AIAKEGFSAN YSVLQSSISE DFKCMEALGM ESGEIHSDQI TASSQYGTNW 310 320 330 340 350 360 SVERSRLNYP ENGWTPGEDS YREWIQVDLG LLRFVTAVGT QGAISKETKK KYYVKTYRVD 370 380 390 400 410 420 ISSNGEDWIT LKEGNKAIIF QGNTNPTDVV FGVFPKPLIT RFVRIKPASW ETGISMRFEV 430 440 450 460 470 480 YGCKITDYPC SGMLGMVSGL ISDSQITASN QGDRNWMPEN IRLVTSRTGW ALPPSPHPYI 490 500 510 520 530 540 NEWLQVDLGD EKIVRGVIIQ GGKHRENKVF MRKFKIAYSN NGSDWKMIMD DSKRKAKSFE 550 560 570 580 590 600 GNNNYDTPEL RAFTPLSTRF IRIYPERATH SGLGLRMELL GCEVEVPTAG PTTPNGNPVD 610 620 630 640 650 660 ECDDDQANCH SGTGDDFQLT GGTTVLATEK PTIIDSTIQS EFPTYGFNCE FGWGSHKTFC 670 680 690 700 710 720 HWEHDSHAQL RWRVLTSKTG PIQDHTGDGN FIYSQADENQ KGKVARLVSP VVYSQSSAHC 730 740 750 760 770 780 MTFWYHMSGS HVGTLRVKLH YQKPEEYDQL VWMVVGHQGD HWKEGRVLLH KSLKLYQVIF 790 800 810 820 830 840 EGEIGKGNLG GIAVDDISIN NHIPQEDCAK PTDLDKKNTE IKIDETGSTP GYEEGKGDKN 850 860 870 880 890 900 ISRKPGNVLK TLDPILITII AMSALGVLLG AVCGVVLYCA CWHNGMSERN LSALENYNFE 910 920 LVDGVKLKKD KLNPHSNYSE A

References

[1]	"Neuropilin is a receptor for the axonal chemorepellent semaphorin III." He Z., Tessier-Lavigne M. Cell 90:739-751(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF018957 mRNA. Translation: AAC53345.1.
IPI	IPI00212307.
UniGene	Rn.10815.
3D structure databases
HSSP	HSSP built from PDB template 1KEX based on UniProtKB O14786.
ProteinModelPortal	Q9QX38.
SMR	Q9QX38. Positions 144-585.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9QX38.
Proteomic databases
PRIDE	Q9QX38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
RGD	621588. Nrp1.
Phylogenomic databases
HOVERGEN	HBG000502.
InParanoid	Q9QX38.
Gene expression databases
ArrayExpress	Q9QX38.
Genevestigator	Q9QX38.
Family and domain databases
Gene3D	2.60.120.290. 2 hits.
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008985. ConA-like_lec_gl_sf. IPR000859. CUB_dom. IPR008979. Galactose-bd-like. IPR000998. MAM_dom. IPR014648. Neuropilin. IPR022579. Neuropilin1_C. IPR027146. NRP1. [Graphical view]
PANTHER	PTHR10127:SF84. PTHR10127:SF84. 1 hit.
Pfam	PF00431. CUB. 2 hits. PF11980. DUF3481. 1 hit. PF00754. F5_F8_type_C. 2 hits. PF00629. MAM. 1 hit. [Graphical view]
PIRSF	PIRSF036960. Neuropilin. 1 hit.
PRINTS	PR00020. MAMDOMAIN.
SMART	SM00042. CUB. 2 hits. SM00231. FA58C. 2 hits. SM00137. MAM. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF49854. CUB. 2 hits. SSF49785. Gal_bind_like. 2 hits.
PROSITE	PS01180. CUB. 2 hits. PS01285. FA58C_1. 2 hits. PS01286. FA58C_2. 2 hits. PS50022. FA58C_3. 2 hits. PS00740. MAM_1. 1 hit. PS50060. MAM_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9QX38_RAT

Accession

Primary (citable) accession number: Q9QX38

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	May 1, 2013
This is version 79 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)