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Protein

Putative exonuclease 012L

Gene

IIV6-012L

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. exonuclease activity Source: UniProtKB-KW
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Exonuclease, Hydrolase, Nuclease

Names & Taxonomyi

Protein namesi
Recommended name:
Putative exonuclease 012L (EC:3.1.11.-)
Gene namesi
ORF Names:IIV6-012L
OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Taxonomic identifieri176652 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
ProteomesiUP000001359 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 624624Putative exonuclease 012LPRO_0000377769Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the 5'-3' exonuclease family.Curated

Phylogenomic databases

KOiK12618.

Family and domain databases

InterProiIPR027073. 5_3_exoribonuclease.
IPR004859. Put_53exo.
[Graphical view]
PANTHERiPTHR12341. PTHR12341. 1 hit.
PfamiPF03159. XRN_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9QSK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIKYFFKWL KTNHSESIKC IDRHDNSQCI DVLLIDMNGI IHNSAQEVYG
60 70 80 90 100
YGSFSFPKEN ACDKKVYSLV CRQIDRMVIQ FKPKELILCI DGVAPRSKQI
110 120 130 140 150
QQRQRRFLAA HDRKKPGTEF NFDCNKGNTS KFDSNSISPG TEFMHNLGRY
160 170 180 190 200
IDIHIKKKQK PAFTGRETTD APQNNWRNKD QSWRQKVDDT AEWSNLTVVF
210 220 230 240 250
ANDKVSGEGE HKLLDYIRKY GNSYYTYCIY GSDADLIMLS MSALTTTAIK
260 270 280 290 300
NIYVLRDEYK SPNYLLINIP NFVKNLIKDV KSNWTDKLDE KRFINDFIFM
310 320 330 340 350
CFMVGNDFLP HIPSIEIMTN GIESMLAFYT KNKNYITDNN GLGEIFNYES
360 370 380 390 400
LLPILKDLEG LEQSLCNEKV NNSEYFRDDL LESSSFLVTN EFGQQKCVNI
410 420 430 440 450
NEYREKYMKK HFESSSEASL MYLEGMQWVL SYYTLKVPDW EWSYKYDYAP
460 470 480 490 500
NLTSIIEAMS FKQIGGTSKK EKNQYKLFPV NSVNSTEVAT SSSGFQKSFS
510 520 530 540 550
MVFQNSLQNT KDWRDKKTKT SSDAIPPFHQ LLFILPPDSS DLLPYPLCEA
560 570 580 590 600
LTNELKIYAP KELIIDRAGK RQEWEGIVLL PKLDQKVVTE CYLKYKPYVT
610 620
EKKDLIRDIK GRTFKYQNGE VSFL
Length:624
Mass (Da):72,577
Last modified:May 1, 2000 - v1
Checksum:i64EB22157D5A5D9A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF303741 Genomic DNA. Translation: AAD48147.1.
RefSeqiNP_149475.1. NC_003038.1.

Genome annotation databases

GeneIDi921678.
KEGGivg:921678.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF303741 Genomic DNA. Translation: AAD48147.1.
RefSeqiNP_149475.1. NC_003038.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi921678.
KEGGivg:921678.

Phylogenomic databases

KOiK12618.

Family and domain databases

InterProiIPR027073. 5_3_exoribonuclease.
IPR004859. Put_53exo.
[Graphical view]
PANTHERiPTHR12341. PTHR12341. 1 hit.
PfamiPF03159. XRN_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
    Jakob N.J., Mueller K., Bahr U., Darai G.
    Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
    Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
    Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.

Entry informationi

Entry nameiEXON_IIV6
AccessioniPrimary (citable) accession number: Q9QSK5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: May 1, 2000
Last modified: April 1, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.