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Q9QSK2 (DPOL_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length1273 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA-directed DNA polymerase involved in viral DNA replication.

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).

Sequence similarities

Belongs to the DNA polymerase type-B family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12731273DNA polymerase 037L
PRO_0000376943

Regions

Coiled coil679 – 837159 Potential

Sequences

Sequence LengthMass (Da)Tools
Q9QSK2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: CC514AD83F7299A3

FASTA1,273147,663
        10         20         30         40         50         60 
MEKTMFAYSW HQTDDETKNW SKSKESLRIY GITDDGKTIC LIVNDFKPFV HVELPSSINW 

        70         80         90        100        110        120 
RQKIGGQPKV QKIMDYLNFI LGDLKPVKNR TIFIDKYKLY GSNYVQTSPG VFQRKKFPYL 

       130        140        150        160        170        180 
VLFFESRKHI KNLEYKLKNT VDVPGFGKIK LNVRETNVSP ILQLCVERNL PSAGWIGFKV 

       190        200        210        220        230        240 
EGRGALAGYG ELVEEKKKFT DCDEEYVISK NYIYSIDKHV PVKAKVMAWD IEVYSEDGNF 

       250        260        270        280        290        300 
PDAMKPGNVV FQISCIFFIV GTSYKQKYLL TLGDPLEYTT TPINEEGCGK DTIVCKFKTE 

       310        320        330        340        350        360 
EDLIIAFSSL QKREKPHITT GWNIFNFDTT FLLKRAKLHR CLPNFLLQGF PKDQLGKEKE 

       370        380        390        400        410        420 
IKWQSKAYGT TDLKFIDCEG ILCIDLMDVV QKEHKLDSYS LNFVAKHFLG SKKDDLKPKE 

       430        440        450        460        470        480 
IFICYREGIK KEVKNIVIHP LSNNLNIYLG KEEIMIENKK FKKPLKPFFR IQNTGKLVSD 

       490        500        510        520        530        540 
EDDSVFHVNY RGEVFSFLIA VHNEEKYEIK TVSEFNNYKN AYGTYTLSAQ KAMAKVGKYC 

       550        560        570        580        590        600 
VQDSVLVADI FEHLQTWLSF SEMSRTCTTP IMTIHVHGQQ VKFFNQVYKY CYDHKTVTDK 

       610        620        630        640        650        660 
ETYKVDEKER YRGAEVFDPV PGLKRNVVPL DFASLYPSLI IARNMCYSTF VDNDDIPDEM 

       670        680        690        700        710        720 
CHVMEWDDHV ACSHDPKVIR KNAITEELEK LKKIANAKKM YTQGTRTYKK MMCSYLVMEN 

       730        740        750        760        770        780 
TKEKTEMSKH LKDLDRENNE LLNIVNKQTP GYIESIKKKI SDLTSERSEI TKKLSKSVMC 

       790        800        810        820        830        840 
VSNRRYRFLK EPKGILPTII QNLLDARKNT RTEIKNYKSR LALLMEKENK SKEDIDEITS 

       850        860        870        880        890        900 
IENLLPILDK RQNSYKISAN SMYGATGVRV GALPFMPIAM CTTYMGRKSI VEVSQYLKEL 

       910        920        930        940        950        960 
GGRVVYGDTD SNYVTFDDVV DKNVKVGTEE FSREMKKLWN HAIEIAKTIS KKFDNPITLE 

       970        980        990       1000       1010       1020 
FENAIYFKFL ILTKKRYMYY TCGKDGNILM DANGKPKMGQ RGVILSRRDN CKYMKDVYAN 

      1030       1040       1050       1060       1070       1080 
VIDKIFDEQS ENEILNGVVE KMLNLYTRQI EFTSCEKDEN YLKNLIVTKS VGDYGGDKAT 

      1090       1100       1110       1120       1130       1140 
FEPILGKNEK GEDKWKIGNY VVPLITDEII KTCGTNGLPM TQNEIKDWYL ERLPCQVQLE 

      1150       1160       1170       1180       1190       1200 
VKIKRRGHNK EEGQRLSYVV TDIGCKGKQS EKIESVEYFK THSKVLKLDY GYYIERLIEP 

      1210       1220       1230       1240       1250       1260 
LDQVFQAVFK NCQEKETIYS DNFRKTKLFS IFEKRGKHSQ ANFTKELHKL CSVTKPKLIN 

      1270 
EIKSFSKPDL VFV 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Phylogenetic position of the Diadromus pulchellus ascovirus DNA polymerase among viruses with large double-stranded DNA genomes."
Stasiak K., Demattei M.V., Federici B.A., Bigot Y.
J. Gen. Virol. 81:3059-3072(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 636-910.
[3]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAD48150.1.
AJ279816 Genomic DNA. Translation: CAC19195.1.
RefSeqNP_149500.1. NC_003038.1.

3D structure databases

ProteinModelPortalQ9QSK2.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ9QSK2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID921680.

Family and domain databases

Gene3D3.30.420.10. 2 hits.
3.90.1600.10. 2 hits.
InterProIPR006172. DNA-dir_DNA_pol_B.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
SMARTSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMSSF53098. SSF53098. 3 hits.
ProtoNetSearch...

Entry information

Entry nameDPOL_IIV6
AccessionPrimary (citable) accession number: Q9QSK2
Secondary accession number(s): Q9DIE2
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: May 1, 2000
Last modified: April 16, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families