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Q9QMH8 (Q9QMH8_HBV) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Precore/core protein EMBL AGB97618.1
Gene names
Name:C EMBL BAA85376.1
Synonyms:preC EMBL BAA85376.1
OrganismHepatitis B virus (HBV) EMBL BAA85376.1
Taxonomic identifier10407 [NCBI]
Taxonomic lineageVirusesRetro-transcribing virusesHepadnaviridaeOrthohepadnavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]
Pan troglodytes (Chimpanzee) [TaxID: 9598]

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Biological processHost-virus interaction SAAS SAAS002006
   DomainRepeat SAAS SAAS002006
   Technical term3D-structure PDB 3V6Z
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

viral process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9QMH8 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 36D77976FBB61196

FASTA21224,322
        10         20         30         40         50         60 
MQLFHLCLII SCSCPTVQAS KLCLGWLWGM DIDPYKEFGA TVELLSFLPS DFFPSVRDLL 

        70         80         90        100        110        120 
DTAAALYRDA LESPEHCSPH HTALRQAILC WGELMTLATW VGTNLEDPAS RDLVVSYVNT 

       130        140        150        160        170        180 
NMGLKFRQLL WFHISCLTFG RETVLEYLVS FGVWIRTPPA YRPPNAPILS TLPETTVVRR 

       190        200        210 
RGRSPRRRTP SPRRRRSQSP RRRRSQSRES QC 

« Hide

References

[1]"Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes."
Okamoto H., Tsuda F., Sakugawa H., Sastrosoewignjo R.I., Imai M., Miyakawa Y., Mayumi M.
J. Gen. Virol. 69:2575-2583(1988) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Genotype D EMBL BAA85376.1.
[2]"Complete nucleotide sequence of a hepatitis B virus, subtype adw2, and identification of three types of C open reading frame."
Preisler-Adams S., Schlayer H.J., Peters T., Korp R., Rasenack J.
Nucleic Acids Res. 21:2258-2258(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Okamoto H.
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Genotype D EMBL BAA85376.1.
[4]Harrison G.L.A., Moyes C., Abbott W., Pryor J., Malani J., Supuri M., Masta A., Teriboriuk B., Toatu T., Shapiro B., Lemey P., Hurles M., Penny D.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: D_F109C_2004 EMBL AGB97618.1, D_KI387C_2005 EMBL AGB97895.1, D_PNG_P043PF_2004 EMBL AGB97795.1, D_PNG_P054PF_2004 EMBL AGB97802.1, D_Samoa_Fa_1991 EMBL AGB97645.1 and D_Tonga_Ng_1992 EMBL AGB97659.1.
[5]"Genomic analysis of hepatitis B virus reveals antigen state and genotype as sources of evolutionary rate variation."
Harrison A., Lemey P., Hurles M., Moyes C., Horn S., Pryor J., Malani J., Supuri M., Masta A., Teriboriki B., Toatu T., Penny D., Rambaut A., Shapiro B.
Viruses 3:83-101(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: D_F109C_2004 EMBL AGB97618.1, D_KI387C_2005 EMBL AGB97895.1, D_PNG_P043PF_2004 EMBL AGB97795.1, D_PNG_P054PF_2004 EMBL AGB97802.1, D_Samoa_Fa_1991 EMBL AGB97645.1 and D_Tonga_Ng_1992 EMBL AGB97659.1.
[6]"Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein."
DiMattia M.A., Watts N.R., Stahl S.J., Grimes J.M., Steven A.C., Stuart D.I., Wingfield P.T.
Structure 21:133-142(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.34 ANGSTROMS) OF 20-178.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HQ700497 Genomic DNA. Translation: AGB97618.1.
HQ700501 Genomic DNA. Translation: AGB97645.1.
HQ700503 Genomic DNA. Translation: AGB97659.1.
HQ700524 Genomic DNA. Translation: AGB97795.1.
HQ700525 Genomic DNA. Translation: AGB97802.1.
HQ700541 Genomic DNA. Translation: AGB97895.1.
AB033559 Genomic DNA. Translation: BAA85376.1.
PIRNKVLA3. C94409.
S33686.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3V6ZX-ray3.34E/F20-178[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR013195. Hepatitis_B_virus_capsid_N.
IPR002006. Viral_capsid_core_Hepatitis.
[Graphical view]
PfamPF08290. Hep_core_N. 1 hit.
PF00906. Hepatitis_core. 1 hit.
[Graphical view]
ProDomPD000874. Vir_capsid_Znf-put_N_Hepatitis. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF47852. SSF47852. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9QMH8_HBV
AccessionPrimary (citable) accession number: Q9QMH8
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 19, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)