Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q9QMH8

- Q9QMH8_HBV

UniProt

Q9QMH8 - Q9QMH8_HBV

Protein
Submitted name:

Precore/core

Gene

C

Organism
Hepatitis B virus (HBV)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    GO - Biological processi

    1. pathogenesis Source: InterPro
    2. viral process Source: UniProtKB-KW

    Keywords - Biological processi

    Host-virus interactionSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Precore/coreImported
    Submitted name:
    Precore/core proteinImported
    Gene namesi
    Name:CImported
    Synonyms:preCImported
    OrganismiHepatitis B virus (HBV)Imported
    Taxonomic identifieri10407 [NCBI]
    Taxonomic lineageiVirusesRetro-transcribing virusesHepadnaviridaeOrthohepadnavirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]
    Pan troglodytes (Chimpanzee) [TaxID: 9598]

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3V6ZX-ray3.34E/F20-178[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatSAAS annotation

    Family and domain databases

    InterProiIPR013195. Hepatitis_B_virus_capsid_N.
    IPR002006. Viral_capsid_core_Hepatitis.
    [Graphical view]
    PfamiPF08290. Hep_core_N. 1 hit.
    PF00906. Hepatitis_core. 1 hit.
    [Graphical view]
    ProDomiPD000874. Vir_capsid_Znf-put_N_Hepatitis. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF47852. SSF47852. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9QMH8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLFHLCLII SCSCPTVQAS KLCLGWLWGM DIDPYKEFGA TVELLSFLPS    50
    DFFPSVRDLL DTAAALYRDA LESPEHCSPH HTALRQAILC WGELMTLATW 100
    VGTNLEDPAS RDLVVSYVNT NMGLKFRQLL WFHISCLTFG RETVLEYLVS 150
    FGVWIRTPPA YRPPNAPILS TLPETTVVRR RGRSPRRRTP SPRRRRSQSP 200
    RRRRSQSRES QC 212
    Length:212
    Mass (Da):24,322
    Last modified:May 1, 2000 - v1
    Checksum:i36D77976FBB61196
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ700497 Genomic DNA. Translation: AGB97618.1.
    HQ700501 Genomic DNA. Translation: AGB97645.1.
    HQ700503 Genomic DNA. Translation: AGB97659.1.
    HQ700524 Genomic DNA. Translation: AGB97795.1.
    HQ700525 Genomic DNA. Translation: AGB97802.1.
    HQ700541 Genomic DNA. Translation: AGB97895.1.
    AB033559 Genomic DNA. Translation: BAA85376.1.
    PIRiC94409. NKVLA3.
    S33686.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ700497 Genomic DNA. Translation: AGB97618.1 .
    HQ700501 Genomic DNA. Translation: AGB97645.1 .
    HQ700503 Genomic DNA. Translation: AGB97659.1 .
    HQ700524 Genomic DNA. Translation: AGB97795.1 .
    HQ700525 Genomic DNA. Translation: AGB97802.1 .
    HQ700541 Genomic DNA. Translation: AGB97895.1 .
    AB033559 Genomic DNA. Translation: BAA85376.1 .
    PIRi C94409. NKVLA3.
    S33686.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3V6Z X-ray 3.34 E/F 20-178 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR013195. Hepatitis_B_virus_capsid_N.
    IPR002006. Viral_capsid_core_Hepatitis.
    [Graphical view ]
    Pfami PF08290. Hep_core_N. 1 hit.
    PF00906. Hepatitis_core. 1 hit.
    [Graphical view ]
    ProDomi PD000874. Vir_capsid_Znf-put_N_Hepatitis. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF47852. SSF47852. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes."
      Okamoto H., Tsuda F., Sakugawa H., Sastrosoewignjo R.I., Imai M., Miyakawa Y., Mayumi M.
      J. Gen. Virol. 69:2575-2583(1988) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Genotype DImported.
    2. "Complete nucleotide sequence of a hepatitis B virus, subtype adw2, and identification of three types of C open reading frame."
      Preisler-Adams S., Schlayer H.J., Peters T., Korp R., Rasenack J.
      Nucleic Acids Res. 21:2258-2258(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Okamoto H.
      Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Genotype DImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: D_F109C_2004Imported, D_KI387C_2005Imported, D_PNG_P043PF_2004Imported, D_PNG_P054PF_2004Imported, D_Samoa_Fa_1991Imported and D_Tonga_Ng_1992Imported.
    5. "Genomic analysis of hepatitis B virus reveals antigen state and genotype as sources of evolutionary rate variation."
      Harrison A., Lemey P., Hurles M., Moyes C., Horn S., Pryor J., Malani J., Supuri M., Masta A., Teriboriki B., Toatu T., Penny D., Rambaut A., Shapiro B.
      Viruses 3:83-101(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: D_F109C_2004Imported, D_KI387C_2005Imported, D_PNG_P043PF_2004Imported, D_PNG_P054PF_2004Imported, D_Samoa_Fa_1991Imported and D_Tonga_Ng_1992Imported.
    6. "Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein."
      DiMattia M.A., Watts N.R., Stahl S.J., Grimes J.M., Steven A.C., Stuart D.I., Wingfield P.T.
      Structure 21:133-142(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.34 ANGSTROMS) OF 20-178.

    Entry informationi

    Entry nameiQ9QMH8_HBV
    AccessioniPrimary (citable) accession number: Q9QMH8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3