Q9QMH8 (Q9QMH8_HBV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Precore/core EMBL BAA85376.1

Submitted name:
Precore/core protein EMBL AGB97618.1

Gene names

Name:	C EMBL BAA85376.1
Synonyms:	preC EMBL BAA85376.1

Organism

Hepatitis B virus (HBV) EMBL BAA85376.1

Taxonomic identifier

10407 [NCBI]

Taxonomic lineage

Viruses › Retro-transcribing viruses › Hepadnaviridae › Orthohepadnavirus

Virus host

Homo sapiens (Human) [TaxID: 9606]
Pan troglodytes (Chimpanzee) [TaxID: 9598]

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Biological process	Host-virus interaction SAAS SAAS002006
Domain	Repeat SAAS SAAS002006
Technical term	3D-structure PDB 3V6Z
Gene Ontology (GO)
Biological_process	pathogenesis Inferred from electronic annotation. Source: InterPro virus-host interaction Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9QMH8 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 36D77976FBB61196	FASTA	212	24,322
	10 20 30 40 50 60 MQLFHLCLII SCSCPTVQAS KLCLGWLWGM DIDPYKEFGA TVELLSFLPS DFFPSVRDLL 70 80 90 100 110 120 DTAAALYRDA LESPEHCSPH HTALRQAILC WGELMTLATW VGTNLEDPAS RDLVVSYVNT 130 140 150 160 170 180 NMGLKFRQLL WFHISCLTFG RETVLEYLVS FGVWIRTPPA YRPPNAPILS TLPETTVVRR 190 200 210 RGRSPRRRTP SPRRRRSQSP RRRRSQSRES QC

References

[1]	"Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes." Okamoto H., Tsuda F., Sakugawa H., Sastrosoewignjo R.I., Imai M., Miyakawa Y., Mayumi M. J. Gen. Virol. 69:2575-2583(1988) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Genotype D EMBL BAA85376.1.
[2]	"Complete nucleotide sequence of a hepatitis B virus, subtype adw2, and identification of three types of C open reading frame." Preisler-Adams S., Schlayer H.J., Peters T., Korp R., Rasenack J. Nucleic Acids Res. 21:2258-2258(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	Okamoto H. Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Genotype D EMBL BAA85376.1.
[4]	Harrison G.L.A., Moyes C., Abbott W., Pryor J., Malani J., Supuri M., Masta A., Teriboriuk B., Toatu T., Shapiro B., Lemey P., Hurles M., Penny D. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: D_F109C_2004 EMBL AGB97618.1, D_KI387C_2005 EMBL AGB97895.1, D_PNG_P043PF_2004 EMBL AGB97795.1, D_PNG_P054PF_2004 EMBL AGB97802.1, D_Samoa_Fa_1991 EMBL AGB97645.1 and D_Tonga_Ng_1992 EMBL AGB97659.1.
[5]	"Genomic analysis of hepatitis B virus reveals antigen state and genotype as sources of evolutionary rate variation." Harrison A., Lemey P., Hurles M., Moyes C., Horn S., Pryor J., Malani J., Supuri M., Masta A., Teriboriki B., Toatu T., Penny D., Rambaut A., Shapiro B. Viruses 3:83-101(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: D_F109C_2004 EMBL AGB97618.1, D_KI387C_2005 EMBL AGB97895.1, D_PNG_P043PF_2004 EMBL AGB97795.1, D_PNG_P054PF_2004 EMBL AGB97802.1, D_Samoa_Fa_1991 EMBL AGB97645.1 and D_Tonga_Ng_1992 EMBL AGB97659.1.
[6]	"Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein." DiMattia M.A., Watts N.R., Stahl S.J., Grimes J.M., Steven A.C., Stuart D.I., Wingfield P.T. Structure 21:133-142(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.34 ANGSTROMS) OF 20-178.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

HQ700497 Genomic DNA. Translation: AGB97618.1.
HQ700501 Genomic DNA. Translation: AGB97645.1.
HQ700503 Genomic DNA. Translation: AGB97659.1.
HQ700524 Genomic DNA. Translation: AGB97795.1.
HQ700525 Genomic DNA. Translation: AGB97802.1.
HQ700541 Genomic DNA. Translation: AGB97895.1.
AB033559 Genomic DNA. Translation: BAA85376.1.

PIR

NKVLA3. C94409.
S33686.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3V6Z	X-ray	3.34	E/F	20-178	[»]

ProteinModelPortal

Q9QMH8.

SMR

Q9QMH8. Positions 30-177.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR013195. Hepatitis_B_virus_capsid_N.
IPR002006. Viral_capsid_core_Hepatitis.
[Graphical view]

Pfam

PF08290. Hep_core_N. 1 hit.
PF00906. Hepatitis_core. 1 hit.
[Graphical view]

ProDom

PD000874. Vir_capsid_Znf-put_N_Hepatitis. 1 hit.
[Graphical view] [Entries sharing at least one domain]

SUPFAM

SSF47852. Viral_capsid_core_Hepatitis. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q9QMH8_HBV

Accession

Primary (citable) accession number: Q9QMH8

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)