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Q9QEJ4

- VP2_PESV

UniProt

Q9QEJ4 - VP2_PESV

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Protein

Protein VP2

Gene

ORF2

Organism
Porcine enteric sapovirus (isolate Swine/United States/Cowden/1980) (Sw/SV/Cowden/1980/US)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

May be a minor structural protein present in one or two copies per virion. May play a role in RNA genome packaging (By similarity).By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF2
OrganismiPorcine enteric sapovirus (isolate Swine/United States/Cowden/1980) (Sw/SV/Cowden/1980/US)
Taxonomic identifieri523795 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
Virus hostiSus scrofa (Pig) [TaxID: 9823]

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
  2. virion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 164164Protein VP2PRO_0000341651Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the sapovirus VP2 family.Curated

Family and domain databases

InterProiIPR008437. Minor_structural_calicivir.
[Graphical view]
PfamiPF05752. Calici_MSP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9QEJ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSWIAGAMQG AGLLGDLAGT IGQIVLHNKQ LNIMNSFNQA QIQLAKDQLK
60 70 80 90 100
QNQQLANQYY EFNANLPVNQ YNSAVSAGFD SVSARQLAGS REVRYLGGQQ
110 120 130 140 150
TPLVHQGQIH QMMFSPKHLM QAQHVVGTFS RGMPGVTPSK GLPRPQGVTA
160
KVPVAGATTT HSKV
Length:164
Mass (Da):17,650
Last modified:May 1, 2000 - v1
Checksum:iDDE6FB048976769D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF182760 Genomic RNA. Translation: AAF04561.1.
RefSeqiNP_051036.1. NC_000940.1.

Genome annotation databases

GeneIDi1457801.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF182760 Genomic RNA. Translation: AAF04561.1 .
RefSeqi NP_051036.1. NC_000940.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1457801.

Family and domain databases

InterProi IPR008437. Minor_structural_calicivir.
[Graphical view ]
Pfami PF05752. Calici_MSP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular characterization of a porcine enteric calicivirus genetically related to Sapporo-like human caliciviruses."
    Guo M., Chang K.O., Hardy M.E., Zhang Q., Parwani A.V., Saif L.J.
    J. Virol. 73:9625-9631(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP2_PESV
AccessioniPrimary (citable) accession number: Q9QEJ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: May 1, 2000
Last modified: October 29, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic genomic RNA.

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3