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Q9QEJ4 (VP2_PESV) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene names
ORF Names:ORF2
OrganismPorcine enteric sapovirus (isolate Swine/United States/Cowden/1980) (Sw/SV/Cowden/1980/US)
Taxonomic identifier523795 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
Virus hostSus scrofa (Pig) [TaxID: 9823]

Protein attributes

Sequence length164 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be a minor structural protein present in one or two copies per virion. May play a role in RNA genome packaging By similarity.

Subcellular location

Virion. Host cytoplasm By similarity.

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic genomic RNA.

Sequence similarities

Belongs to the sapovirus VP2 family.

Ontologies

Keywords
   Cellular componentHost cytoplasm
Virion
Gene Ontology (GO)
   Cellular_componenthost cell cytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

virion

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 164164Protein VP2
PRO_0000341651

Sequences

Sequence LengthMass (Da)Tools
Q9QEJ4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: DDE6FB048976769D

FASTA16417,650
        10         20         30         40         50         60 
MSWIAGAMQG AGLLGDLAGT IGQIVLHNKQ LNIMNSFNQA QIQLAKDQLK QNQQLANQYY 

        70         80         90        100        110        120 
EFNANLPVNQ YNSAVSAGFD SVSARQLAGS REVRYLGGQQ TPLVHQGQIH QMMFSPKHLM 

       130        140        150        160 
QAQHVVGTFS RGMPGVTPSK GLPRPQGVTA KVPVAGATTT HSKV 

« Hide

References

[1]"Molecular characterization of a porcine enteric calicivirus genetically related to Sapporo-like human caliciviruses."
Guo M., Chang K.O., Hardy M.E., Zhang Q., Parwani A.V., Saif L.J.
J. Virol. 73:9625-9631(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF182760 Genomic RNA. Translation: AAF04561.1.
RefSeqNP_051036.1. NC_000940.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1457801.

Family and domain databases

InterProIPR008437. Minor_structural_calicivir.
[Graphical view]
PfamPF05752. Calici_MSP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVP2_PESV
AccessionPrimary (citable) accession number: Q9QEJ4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: May 1, 2000
Last modified: April 3, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families