ID   CAPSD_POLVP             Reviewed;         372 AA.
AC   Q9QBU3;
DT   05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   13-SEP-2023, entry version 54.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=p40;
GN   ORFNames=ORF2;
OS   Pothos latent virus (isolate Pigeonpea/India) (PoLV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Aureusvirus; Aureusvirus aurei.
OX   NCBI_TaxID=652109;
OH   NCBI_TaxID=3821; Cajanus cajan (Pigeon pea) (Cajanus indicus).
OH   NCBI_TaxID=174212; Pothos.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   AGRICOLA=IND23224278;
RA   Lava Kumar P., Jones A.T., Sreenivasulu P., Fenton B., Reddy D.V.R.;
RT   "Characterization of a virus from pigeonpea with affinities to species in
RT   the genus Aureusvirus, family Tombusviridae.";
RL   Plant Dis. 85:208-215(2001).
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000305}.
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DR   EMBL; AJ243370; CAB59794.1; -; Genomic_RNA.
DR   SMR; Q9QBU3; -.
DR   Proteomes; UP000000572; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Reference proteome; T=3 icosahedral capsid protein; Virion.
FT   CHAIN           1..372
FT                   /note="Capsid protein"
FT                   /id="PRO_0000399482"
SQ   SEQUENCE   372 AA;  39788 MW;  FC21F6D73135F6B8 CRC64;
     MALVKRNNNM ALIATEAGKL AAVKAGQVML SPAGRELIWN GVNWVRRKLG RSKKSDVILH
     PGVLPGAIAA PVANTRIIRA SKPKFTRSKG SVTIAHRELL GQFNNSSGLV VNGGVSGNLY
     RINPSNPVVF PWLQGIAASF DQYKFDRVQL QYVPMCATTE TGRVAIYFDK DQQDVEPADR
     VELANMGHWT ESAPWCESTL NVPVDNVKRF MNDNTTTDRK LVDLGQIGLA TYGGGSTNPV
     GDLFIHYTIT LFEPQPLASL VETEQSGAGA APFGTNLVTV SSNATTTIIT FRGPGVYLLA
     LSQRAASFTT LVTAGGAVVN SHTTLFSGPA YQSIANITAT IPGGSITYNG TLFGNYTLQV
     TRAKISNNAT LI
//